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10x Genomics

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https://10xgenomics.com
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cellranger cellranger Public

10x Genomics Single Cell Analysis

Rust 424 97
loupeR loupeR Public

Convert Seurat objects to 10x Genomics Loupe files.

R 132 16
spaceranger spaceranger Public

Rust 12 1

Repositories

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Showing 10 of 73 repositories

analysis_guides Public
10x Genomics analysis guides files

10XGenomics/analysis_guides’s past year of commit activity

Jupyter Notebook 17 11 1 0 Updated Jul 22, 2025
intel-mkl-src Public Forked from rust-math/intel-mkl-src
Redistribute Intel MKL as a crate

10XGenomics/intel-mkl-src’s past year of commit activity

Rust 1 25 0 3 Updated Jul 21, 2025
spaceranger Public

10XGenomics/spaceranger’s past year of commit activity

Rust 12 1 0 2 Updated Jul 16, 2025
orbit Public
Rust wrapper for STAR aligner

10XGenomics/orbit’s past year of commit activity

C 17 MIT 3 0 5 Updated Jul 14, 2025
hover_net Public Forked from vqdang/hover_net
Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.

10XGenomics/hover_net’s past year of commit activity

Python 0 MIT 251 0 4 Updated Jul 9, 2025
loupeR Public
Convert Seurat objects to 10x Genomics Loupe files.

10XGenomics/loupeR’s past year of commit activity

R 132 16 3 0 Updated Jul 7, 2025
visium-hd-long-reads Public

10XGenomics/visium-hd-long-reads’s past year of commit activity

Python 1 0 0 0 Updated Jun 27, 2025
scan-rs Public
Single-cell analysis methods in Rust

10XGenomics/scan-rs’s past year of commit activity

Rust 23 1 1 1 Updated Jun 17, 2025
websummary Public
Generate an HTML report in Rust

10XGenomics/websummary’s past year of commit activity

Rust 5 0 0 2 Updated Jun 17, 2025
image-analysis-rs Public

10XGenomics/image-analysis-rs’s past year of commit activity

Rust 0 0 0 2 Updated Jun 17, 2025

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