Merge pull request #39 from jakobnissen/fixlinecount

Fix FASTQ line counting bug
BioJulia · Feb 22, 2021 · ff646a0 · ff646a0
2 parents b0c50a4 + 7c80fb9
commit ff646a0
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/fastq/readrecord.jl b/src/fastq/readrecord.jl
@@ -40,7 +40,7 @@ machine = (function ()
     end
 
     sep = re.opt('\r') * re"\n"
-    sep.actions[:exit] = [:sep, :countline]
+    sep.actions[:exit] = [:countline, :sep]
 
     record = re.cat(header1, newline, sequence, newline, header2, newline, quality)
     record.actions[:enter] = [:mark]