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Fixes #15
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@kdyrhage
kdyrhage committed Nov 12, 2024
1 parent 40a21c4 commit 7e601c8
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2 changes: 1 addition & 1 deletion src/GFF/GFF.jl
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Expand Up @@ -6,7 +6,7 @@ using BioGenerics
using DataFrames
using CodecZlib

import ..GenomicAnnotations: Record, Gene, AbstractGene, GeneDataView, Locus
import ..GenomicAnnotations: Record, Gene, AbstractGene, GeneDataView, Locus, Join, Order
import ..GenomicAnnotations: SpanLocus, ClosedSpan, Complement
import ..GenomicAnnotations: sequence, iscomplement, iscomplete, addgene!, pushproperty!, feature, index, locus, oneline
export sequence, iscomplement, iscomplete, feature, index, locus
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4 changes: 2 additions & 2 deletions src/GFF/writer.jl
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Expand Up @@ -55,10 +55,10 @@ function gffstring(gene::Gene)
end
end
end
if locus(gene).position isa Vector
if locus(gene) isa Union{Join, Order}
s = String(take!(buf))
res = IOBuffer()
for pos in locus(gene).position
for pos in locus(gene).loc
println(res, join([parent(gene).name,
get(gene, :source, "."),
feature(gene),
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Registration pull request created: JuliaRegistries/General/119231

Tip: Release Notes

Did you know you can add release notes too? Just add markdown formatted text underneath the comment after the text
"Release notes:" and it will be added to the registry PR, and if TagBot is installed it will also be added to the
release that TagBot creates. i.e.

@JuliaRegistrator register

Release notes:

## Breaking changes

- blah

To add them here just re-invoke and the PR will be updated.

Tagging

After the above pull request is merged, it is recommended that a tag is created on this repository for the registered package version.

This will be done automatically if the Julia TagBot GitHub Action is installed, or can be done manually through the github interface, or via:

git tag -a v0.4.1 -m "<description of version>" 7e601c805bc196b00c9d75d6e7b329c648b5659b
git push origin v0.4.1

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