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@CarragherLab

CarragherLab

Edinburgh Drug Discovery group, Cancer Research UK Edinburgh Centre

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  1. cptools2 cptools2 Public

    Running cellprofiler on eddie3 / SGE clusters

    Python 4 2

  2. scissorhands scissorhands Public

    Generate eddie3 submission scripts in python

    Python

  3. meld meld Public

    Collect distributed cellprofiler results into sqlite databases.

    Python 1

  4. parserix parserix Public

    parse metadata from ImageXpress paths

    Python

  5. ImageXpressR ImageXpressR Public

    R package for extracting metadata from ImageXpress file paths

    R

Repositories

Showing 10 of 11 repositories
  • sc_morph_tracking Public

    The script for article "Single-cell morphological tracking of cell states to identify small-molecule modulators of liver differentiation".

    CarragherLab/sc_morph_tracking’s past year of commit activity
    R 0 0 0 0 Updated Aug 16, 2024
  • phenonaut Public

    A tool for exploration of multiomic phenotypic space

    CarragherLab/phenonaut’s past year of commit activity
    Python 8 Apache-2.0 2 0 0 Updated Aug 5, 2024
  • install_cellprofiler Public

    Documentation and scripts to install CellProfiler on eddie3

    CarragherLab/install_cellprofiler’s past year of commit activity
    Shell 0 1 0 0 Updated Apr 28, 2022
  • meld Public

    Collect distributed cellprofiler results into sqlite databases.

    CarragherLab/meld’s past year of commit activity
    Python 0 1 4 0 Updated Nov 24, 2021
  • cptools2 Public

    Running cellprofiler on eddie3 / SGE clusters

    CarragherLab/cptools2’s past year of commit activity
    Python 4 2 14 0 Updated Jun 24, 2021
  • parserix Public

    parse metadata from ImageXpress paths

    CarragherLab/parserix’s past year of commit activity
    Python 0 0 0 0 Updated May 10, 2021
  • scissorhands Public

    Generate eddie3 submission scripts in python

    CarragherLab/scissorhands’s past year of commit activity
    Python 0 MIT 0 0 0 Updated May 4, 2021
  • 2018-08_transfer_ML_between_cell_lines Public
    CarragherLab/2018-08_transfer_ML_between_cell_lines’s past year of commit activity
    Python 3 1 1 0 Updated Nov 8, 2018
  • cpchecker Public

    Check for failed cellprofiler jobs on eddie3

    CarragherLab/cpchecker’s past year of commit activity
    Python 0 0 0 0 Updated Oct 3, 2018
  • CellProfiler Public Forked from CellProfiler/CellProfiler

    An open-source application for biological image analysis

    CarragherLab/CellProfiler’s past year of commit activity
    Python 0 384 0 0 Updated Sep 24, 2018
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