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12 followers · 5 following
  • Public Health Agency of Canada
  • Winnipeg, MB, Canada
  • 02:02 - 5h behind
  • LinkedIn in/darian-hole

Achievements

Achievement: QuickdrawAchievement: YOLOAchievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor

Achievements

Achievement: QuickdrawAchievement: YOLOAchievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor

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@phac-nml @PHAC-NMLB-COG

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  1. phac-nml/galaxy_tools Public

    Contains a set of Galaxy Tools mostly written by the Bioinformatics core at NML

    Perl 16 25

  2. phac-nml/biohansel Public

    Rapidly subtype microbial genomes using single-nucleotide variant (SNV) subtyping schemes

    Python 27 7

  3. phac-nml/ncov-dehoster Public

    Removal of human reads from ncov nanopore sequencing data

    Nextflow 6 4

  4. phac-nml/legiovue Public

    A nextflow pipeline for whole-genome analysis of *Legionella pneumophila*

    Nextflow 1 2

  5. phac-nml/viralassembly Public

    Assemble and QC viral reads with a reference scheme

    Nextflow 1

  6. phac-nml/ncov2019-artic-nf Public

    Forked from connor-lab/ncov2019-artic-nf

    A Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019

    Python 2 1

130 contributions in the last year

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Contribution activity

April 2025

Created 2 commits in 2 repositories
Opened 1 pull request in 1 repository
phac-nml/viralassembly 1 merged
Reviewed 2 pull requests in 1 repository
phac-nml/pipeline-standards 2 pull requests
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