Added the override flag to eggnog

EBI-Metagenomics · Dec 4, 2024 · c45ccce · c45ccce
1 parent db0033f
commit c45ccce
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/modules/local/eggnog.nf b/modules/local/eggnog.nf
@@ -52,7 +52,8 @@ process EGGNOG_MAPPER {
         --cpu ${task.cpus} \
         --tax_scope 'prokaryota_broad' \
         --annotate_hits_table ${annotation_hit_table} ${db_mem_flag} \
-        -o ${meta.prefix}
+        -o ${meta.prefix} \
+        --override
 
         cat <<-END_VERSIONS > versions.yml
         "${task.process}":