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Issues list

Code needs to be updated for Illumina MethylationEPIC-8 v2.0 arrays
#132 opened Nov 9, 2024 by petermchale
2
methylize diff_meth_regions throwing an error
#131 opened May 23, 2024 by harshaa10
Unable to download the latest version of methylsuite v1.7.1
#130 opened May 22, 2024 by harshaa10
Any groups for exchange?
#129 opened Oct 19, 2023 by Shahin-rmz
methylprep generates only csv files, so methylcheck doesn't work
#128 opened Aug 17, 2023 by chrishenan
methylprep not working with pandas version >2 due to API changes
#125 opened Jul 19, 2023 by ghost
Analysing Infinium MethylationEPIC v2.0 Kit already implemented?
#122 opened May 31, 2023 by claus-h-g
8
copy number
#119 opened Apr 4, 2023 by AntoniaGocke
How to control filtering in command line
#116 opened Aug 23, 2022 by rowanhowellGE
Adapting sample_sheets.py to Windows users
#110 opened May 25, 2022 by f-marchi
Control of output file location/names
#104 opened Mar 14, 2022 by paulaberry
1
Manifest
#101 opened Jan 28, 2022 by stefdecondor31
3
CLI does not import the right module
#100 opened Dec 21, 2021 by lbeltrame
RFE: Allow to specify output directory of methylprep-cli
#99 opened Dec 21, 2021 by lbeltrame
download support TAR of BED files too enhancement New feature or request
#90 opened Jul 21, 2021 by marcmaxson
1
methylprep.read_geo exceptions enhancement New feature or request
#57 opened Apr 7, 2020 by marcmaxson
save_control only works with single batches enhancement New feature or request
#51 opened Mar 28, 2020 by marcmaxson
RUVm (postprocessing method to reduce batch effects) enhancement New feature or request Priority: Long-term Planned 6-12 months out
#33 opened Oct 30, 2019 by marcmaxson
1
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