Update MANIFEST.in (#197)

* Update MANIFEST.in * Update MANIFEST.in * Update MANIFEST.in * Update MANIFEST.in * Update MANIFEST.in * Pre-execute notebooks * Add codespell words to ignore * Edit MANIFEST.in to exclude data_analysis notebooks Because of problems related to the size of the package we need to exclude the example data. However, there is no currently available data source to download it from. Hence for now we need to exclude these notebooks from the release. * Cleared outputs in data analysis notebooks * Update MANIFEST.in * Cleared cell data in Remove_lightleak and remove line in MANIFEST.in that pruned the example_data directory * Updated Using_temperature_from_filter_ratio notebook to download data it uses * Added lxml to requirements/docs.txt * Added progress=False flag to Fido.fetch commands * Added lxml to setup.cfg * Added zeep to setup.cfg * Added drms to setup.cfg * Removed drms, lxml and zeep from setup.cfg and added sunpy[net] >= 3.0.0 under docs --------- Co-authored-by: Jonathan Slavin <[email protected]> Co-authored-by: Jonathan Slavin <[email protected]>
HinodeXRT · Oct 30, 2023 · 56baa26 · 56baa26
1 parent 691cf6c
commit 56baa26
Show file tree

Hide file tree

Showing 5 changed files with 26 additions and 43 deletions.
diff --git a/MANIFEST.in b/MANIFEST.in
@@ -13,5 +13,5 @@ prune build
 prune docs/_build
 prune docs/api
 prune tests
-
+prune xrtpy/*/tests
 global-exclude *.pyc *.o
diff --git a/docs/notebooks/data_analysis/Deconvolving_XRT_images.ipynb b/docs/notebooks/data_analysis/Deconvolving_XRT_images.ipynb
diff --git a/docs/notebooks/data_analysis/Using_temperature_from_filter_ratio.ipynb b/docs/notebooks/data_analysis/Using_temperature_from_filter_ratio.ipynb
@@ -51,10 +51,11 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "import pkg_resources\n",
     "import sunpy.map\n",
     "\n",
-    "from pathlib import Path"
+    "from pathlib import Path\n",
+    "from sunpy.net import attrs as a\n",
+    "from sunpy.net import Fido"
    ]
   },
   {
@@ -64,11 +65,11 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "directory = pkg_resources.resource_filename(\n",
-    "    \"xrtpy\", \"response/tests/data/temperature_from_filter_ratio_testing_files\"\n",
+    "result = Fido.search(\n",
+    "    a.Time(\"2011-01-28 01:31:55\", \"2011-01-28 01:32:05\"), a.Instrument(\"xrt\")\n",
     ")\n",
     "\n",
-    "data_files = sorted(Path(directory).glob(\"L1_XRT20110128_*.*.fits\"))"
+    "data_files = Fido.fetch(result, progress=False)"
    ]
   },
   {
@@ -80,7 +81,7 @@
    "source": [
     "file1 = data_files[1]\n",
     "file2 = data_files[0]\n",
-    "print(\"Files used:\\n\", file1.name, \"\\n\", file2.name)"
+    "print(\"Files used:\\n\", file1, \"\\n\", file2)"
    ]
   },
   {
@@ -117,7 +118,7 @@
     ")\n",
     "print(\n",
     "    \"\\n File 1 used:\\n\",\n",
-    "    file1.name,\n",
+    "    file1,\n",
     "    \"\\n Observation date:\",\n",
     "    map1.fits_header[\"DATE_OBS\"],\n",
     "    map1.fits_header[\"TIMESYS\"],\n",
@@ -134,7 +135,7 @@
     "\n",
     "print(\n",
     "    \"\\nFile 2 used:\\n\",\n",
-    "    file2.name,\n",
+    "    file2,\n",
     "    \"\\n Observation date:\",\n",
     "    map2.fits_header[\"DATE_OBS\"],\n",
     "    map2.fits_header[\"TIMESYS\"],\n",

diff --git a/pyproject.toml b/pyproject.toml
@@ -46,10 +46,17 @@ lines_between_types = 1
 [tool.codespell]
 skip = "*.genx,*.geny,*.png,*egg*,.git,.hypothesis,.nox,.tox,.idea,__pycache__,_build"
 ignore-words-list = """
+4rd,
+bu,
 circularly,
+egde,
+fo,
 nd,
+ons,
 sav,
-te
+te,
+tne,
+ue
 """
 
 [tool.gilesbot]

diff --git a/setup.cfg b/setup.cfg
@@ -77,6 +77,7 @@ docs =
     sphinx_automodapi
     sphinx_rtd_theme >= 1.2
     sphinxcontrib-bibtex >= 2.5
+    sunpy[net] >= 3.0.0
     towncrier >= 22.12
 developer =
     # install everything for developers