Fix random seed

Illumina · Dec 9, 2019 · 2d65678 · 2d65678
1 parent e7fa0e0
commit 2d65678
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Showing 4 changed files with 6 additions and 2 deletions.
diff --git a/examples/outlier/example_dataset.outlier_locus.tsv b/examples/outlier/example_dataset.outlier_locus.tsv
@@ -1,2 +1,2 @@
 #contig	start	end	unit	top_case_zscore	high_case_counts	all_counts
-StrA	1702	2159	AGC	1.57	sample1:42.41	42.41,2.11,15.77,8.41,13.67,14.66,1.06,3.15,20.86,1.06,2.11,4.21,3.17,12.62,7.33,15.71,2.11,11.52
+StrA	1702	2159	AGC	1.42	sample1:42.41	42.41,2.11,15.77,8.41,13.67,14.66,1.06,3.15,20.86,1.06,2.11,4.21,3.17,12.62,7.33,15.71,2.11,11.52
diff --git a/examples/outlier/example_dataset.outlier_motif.tsv b/examples/outlier/example_dataset.outlier_motif.tsv
@@ -1,2 +1,2 @@
 motif	top_case_zscore	high_case_counts	all_counts
-AGC	1.53	sample1:5.05	5.05
+AGC	1.46	sample1:5.05	5.05
diff --git a/scripts/casecontrol.py b/scripts/casecontrol.py
@@ -22,6 +22,7 @@
 #
 
 import argparse
+import numpy as np
 
 import core.common as common
 import casecontrol.locusworkflow
@@ -150,6 +151,7 @@ def run_motif_workflow(args):
 
 
 def main():
+    np.random.seed(42)
     common.init_logger()
     parser = initialize_parser()
     subparsers = initialize_subparsers(parser)

diff --git a/scripts/outlier.py b/scripts/outlier.py
@@ -22,6 +22,7 @@
 #
 
 import argparse
+import numpy as np
 
 import core.common as common
 import outlier.locusworkflow
@@ -101,6 +102,7 @@ def run_motif_workflow(args):
 
 
 def main():
+    np.random.seed(42)
     common.init_logger()
     parser = initialize_parser()
     subparsers = initialize_subparsers(parser)