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@MonashBioinformaticsPlatform

Monash Bioinformatics Platform

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  1. RSeQC RSeQC Public

    fork of RSeQC python RNAseq metrics suit of tools

    Python 48 19

  2. LFQ-Analyst LFQ-Analyst Public

    The repo for LFQ-Analyst

    HTML 30 14

  3. bio-ansible bio-ansible Public

    Proof of concept to use ansible + Lmod to deploy a bioinformatics server

    Jinja 24 16

  4. varistran varistran Public

    R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data

    R 21 3

  5. polyApipe polyApipe Public

    polyApipe

    R 17 6

  6. learning-resource-links learning-resource-links Public

    An awesome list of learning resources for bioinformatics, genomics and computational biology

    17 4

Repositories

Showing 10 of 93 repositories
  • SpatialTranscriptomics_SelfTraining Public

    Spatial Transcriptomics Self-Training Material

    MonashBioinformaticsPlatform/SpatialTranscriptomics_SelfTraining’s past year of commit activity
    R 1 0 0 0 Updated Jul 14, 2025
  • laxy Public

    Laxy Genomics Pipelines

    MonashBioinformaticsPlatform/laxy’s past year of commit activity
    Python 3 Apache-2.0 1 65 (7 issues need help) 0 Updated Jul 14, 2025
  • learning-resource-links Public

    An awesome list of learning resources for bioinformatics, genomics and computational biology

    MonashBioinformaticsPlatform/learning-resource-links’s past year of commit activity
    17 4 0 0 Updated Jul 4, 2025
  • rocker-ultra Public

    Containerised RStudio with bells+whistles for HPC and everywhere

    MonashBioinformaticsPlatform/rocker-ultra’s past year of commit activity
    Dockerfile 4 GPL-2.0 3 5 1 Updated Jul 1, 2025
  • SingleCell_Multiomics_Danio_rerio Public

    This repository contains the analysis of single cell multiomics of Danio rerio

    MonashBioinformaticsPlatform/SingleCell_Multiomics_Danio_rerio’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jun 27, 2025
  • bio-ansible Public

    Proof of concept to use ansible + Lmod to deploy a bioinformatics server

    MonashBioinformaticsPlatform/bio-ansible’s past year of commit activity
    Jinja 24 Apache-2.0 16 1 0 Updated Jun 5, 2025
  • fqdemux Public

    A simple Nextflow pipeline for demultiplexing FASTQs

    MonashBioinformaticsPlatform/fqdemux’s past year of commit activity
    Nextflow 0 MIT 0 0 0 Updated Jun 4, 2025
  • varistran Public

    R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data

    MonashBioinformaticsPlatform/varistran’s past year of commit activity
    R 21 LGPL-2.1 3 0 0 Updated May 23, 2025
  • monashbioinformaticsplatform.github.io Public

    Main Page

    MonashBioinformaticsPlatform/monashbioinformaticsplatform.github.io’s past year of commit activity
    HTML 0 0 0 0 Updated Mar 4, 2025
  • .github Public

    the github for Monash Bioinformatics Platform is the repository for the Bioinformatics Node of Monash Genomics and Bioinformatics Platform.

    MonashBioinformaticsPlatform/.github’s past year of commit activity
    0 0 0 0 Updated Mar 4, 2025
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