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Install datalad with pip
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Install git-annex with apt
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aswinnarayanan committed Dec 6, 2024
1 parent 622ad46 commit 94b28f8
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3 changes: 2 additions & 1 deletion Dockerfile
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Expand Up @@ -135,6 +135,7 @@ RUN apt-get update --yes \
emacs \
gedit \
git \
git-annex \
gnome-keyring \
graphviz \
htop \
Expand Down Expand Up @@ -202,7 +203,7 @@ RUN conda install -c conda-forge nb_conda_kernels \
RUN conda config --system --prepend envs_dirs '~/conda-environments'

# Add datalad-container datalad-osf osfclient ipyniivue to the conda environment
RUN /opt/conda/bin/pip install nipype matplotlib datalad-container datalad-osf osfclient ipyniivue \
RUN /opt/conda/bin/pip install datalad nipype matplotlib datalad-container datalad-osf osfclient ipyniivue \
&& rm -rf /home/${NB_USER}/.cache

# Install jupyter-server-proxy and disable announcements
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