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JustinDoIt committed Apr 29, 2023
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# List of papers about Proteins Design using Deep Learning

> Inspired by [Kevin Kaichuang Yang](https://github.com/yangkky)'s awesome [Machine-learning-for-proteins](https://github.com/yangkky/Machine-learning-for-proteins), we established this repository with a sharper focus on **deep learning for protein design**, which is a rapidly evolving field.
> [Contributions](https://github.com/Peldom/papers_for_protein_design_using_DL/blob/main/CONTRIBUTING.md) and [Suggestions](https://github.com/Peldom/papers_for_protein_design_using_DL/issues) are warmly welcome.
<!-- >
>1. Mini protein, binders, metalloprotein, antibody, peptide & molecule designs are included.
>2. More de novo protein design paper list at [Wangchentong](https://github.com/Wangchentong)'s GitHub repo: [paper_for_denovo_protein_design](https://github.com/Wangchentong/paper_for_denovo_protein_design).
>3. Our notes of these papers are shared in a **[Zhihu Column](https://www.zhihu.com/column/c_1475864742820929537)** (simplified Chinese/English), more suggested notes at [RosettAI](https://www.zhihu.com/column/rosettastudy). -->
> [Contributions](https://github.com/Peldom/papers_for_protein_design_using_DL/blob/main/CONTRIBUTING.md) and [Suggestions](https://github.com/Peldom/papers_for_protein_design_using_DL/issues) are warmly welcome.

<!-- [***Updated at 2023-04-27:***]() -->
*Updated at 2023-04-27:*
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<!-- <img src="dl_pd.png" alt="deep learning for protein design" width="500"> -->
<img src="dl_pd.png" alt="deep learning for protein design">
<img src="cover.jpg" alt="deep learning for protein design">
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<a href="">TRFold2-based</a> •
<a href="">GPT-based</a> •
<a href="">ESM-based</a> •
<a href="">Sampling-based</a>
<a href="">Sampling-based</a>
<br>
<strong><a href="">3) Function to Scaffold</a></strong>
<br>
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