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BRNEquilibrate
BRNEquilibrate PublicA package for finding steady states to biochemical reaction network models.
Julia 1
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DiffEqDocs.jl
DiffEqDocs.jl PublicForked from SciML/DiffEqDocs.jl
Documentation for the DiffEq ecosystem
Julia
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DiffEqBiological.jl
DiffEqBiological.jl PublicForked from SciML/Catalyst.jl
DiffEq related functionality for defining biological models
Julia
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Latexify.jl
Latexify.jl PublicForked from korsbo/Latexify.jl
Convert julia objects to LaTeX equations, arrays or other environments.
Julia
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HomotopyContinuation.jl
HomotopyContinuation.jl PublicForked from JuliaHomotopyContinuation/HomotopyContinuation.jl
A Julia package for solving systems of polynomials via homotopy continuation.
Julia
1,553 contributions in the last year
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Contribution activity
April 2025
Created 8 commits in 1 repository
Created a pull request in SciML/Catalyst.jl that received 5 comments
Add additional Jacobian tests (including sparsity)
After the latest test failures in the spatial tests I checked and realised that we don't actually properly test whether the generated sparse Jacobi…
Opened 3 other pull requests in 1 repository
SciML/Catalyst.jl
2
open
1
merged
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Example: Measuring activation time distribution
This contribution was made on Apr 1
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Examples of ways to model noise
This contribution was made on Apr 1
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Remove note about structural identifiability removal from history file.
This contribution was made on Apr 1
Reviewed 6 pull requests in 1 repository
SciML/Catalyst.jl
6 pull requests
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Re-enable conservation laws for
NonlinearSystem
sThis contribution was made on Apr 4 -
Remake for conservation laws update
This contribution was made on Apr 3
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Add example of how to compute nullclines using bifurcation kit
This contribution was made on Apr 3
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Add additional Jacobian tests (including sparsity)
This contribution was made on Apr 3
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WIP: beginning to refactor network analysis docs
This contribution was made on Apr 2
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Example: Measuring activation time distribution
This contribution was made on Apr 1
Created an issue in SciML/ModelingToolkit.jl that received 5 comments
structural_simplify
elimiantes differently for ODESystem
and NonlinearSystem
s
Something popped up while going through the Catalyst tests. Simple example. Here, I'd imagine that we could eliminate A
in both cases. However, str…
Opened 8 other issues in 4 repositories
SciML/ModelingToolkit.jl
5
open
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Warning: Initialization system is overdetermined
onremake
cases where it might (might) be redundantThis contribution was made on Apr 4 -
Sparse jacobians not working
This contribution was made on Apr 2
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No jacobian prototype for sparse jacobian
SDEProblem
s?This contribution was made on Apr 2 -
How to avoid
Did not converge after
maxiters = 1000substitutions.
warnings?This contribution was made on Apr 1 -
Sub-optimal display of vector parameters from systems
This contribution was made on Apr 1
SciML/ReactionNetworkImporters.jl
1
open
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Add
verbose = false
optionThis contribution was made on Apr 3
SciML/OrdinaryDiffEq.jl
1
open
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Sparse jacobians no longer working?
This contribution was made on Apr 2
SciML/Catalyst.jl
1
open
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Enable interpolation of functional variable (but not its argument).
This contribution was made on Apr 1