Skip to content
@TurtleTools

TurtleTools

Pinned Loading

  1. portein Public

    2D portraits of 3D protein structures

    Python 21

  2. geometricus Public

    A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.

    Jupyter Notebook 37 11

  3. afdb-shapemer-darkness Public

    Jupyter Notebook 4 1

Repositories

Showing 10 of 11 repositories
  • portein Public

    2D portraits of 3D protein structures

    Python 21 MIT 0 0 0 Updated Apr 18, 2025
  • caretta Public

    A software-suite to perform multiple protein structure alignment and structure feature extraction.

    Python 29 BSD-3-Clause 5 6 0 Updated Aug 9, 2023
  • geometricus Public

    A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.

    Jupyter Notebook 37 MIT 11 5 1 Updated Jun 8, 2023
  • afdb-shapemer-darkness Public
    Jupyter Notebook 4 1 0 0 Updated Mar 15, 2023
  • MomentLearn Public
    Jupyter Notebook 0 0 0 0 Updated Mar 14, 2022
  • archelon Public

    locality sensitive hashing implementation

    Python 1 MIT 0 0 0 Updated Oct 25, 2021
  • geometricus_deep_learning Public

    Exploring geometric deep learning algorithms with rotation invariant moments for protein structures

    Jupyter Notebook 1 0 0 0 Updated Oct 19, 2021
  • alphafold-structural-space Public

    Structural space exploration of AlphaFold DB

    Jupyter Notebook 12 3 0 0 Updated Oct 8, 2021
  • pretrain-gnns Public Forked from snap-stanford/pretrain-gnns

    Strategies for Pre-training Graph Neural Networks

    Python 0 MIT 167 0 0 Updated Aug 11, 2021
  • TurtleTools.github.io Public

    GitHub pages repository for hosting documentation

    HTML 0 0 0 0 Updated Jul 28, 2021
View all repositories