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Wittelab

Software repositories for the BAGELabs

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  1. orchid orchid Public

    A novel management, annotation, and machine learning framework for analyzing cancer mutations

    Jupyter Notebook 31 8

  2. pancancer_pleiotropy pancancer_pleiotropy Public

    Pan cancer summary statistics from meta analyses of UK Biobank and Kaiser GERA cohorts.

    15 3

  3. samasy samasy Public

    A SAmple MAnagement SYstem for robotic transfer of samples in 96 well plates

    Ruby 3 2

  4. cfdna-panel-publication cfdna-panel-publication Public

    Supporting material for the manuscript titled: "A machine learning approach to optimizing cell-free DNA sequencing panels: with an application to prostate cancer"

    Jupyter Notebook 3

  5. PrCa_TWAS PrCa_TWAS Public

    Scripts and Data for PrCa TWAS Project

    R 2 3

  6. episoft episoft Public

    episoft

    1

Repositories

Showing 10 of 12 repositories
  • iges-app Public

    A simple web app to allow audience member to suggest and vote on words for a word cloud

    Wittelab/iges-app’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Oct 24, 2024
  • samasy Public

    A SAmple MAnagement SYstem for robotic transfer of samples in 96 well plates

    Wittelab/samasy’s past year of commit activity
    Ruby 3 2 1 2 Updated Aug 23, 2024
  • orchid Public

    A novel management, annotation, and machine learning framework for analyzing cancer mutations

    Wittelab/orchid’s past year of commit activity
    Jupyter Notebook 31 8 4 0 Updated Jul 4, 2024
  • sTRAP_SNP_TF_Data Public

    Scripts & Data for Predicting Transcription Factor Binding Sites Modulated by Single Nucleotide Polymorphisms

    Wittelab/sTRAP_SNP_TF_Data’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Oct 5, 2020
  • pancancer_pleiotropy Public

    Pan cancer summary statistics from meta analyses of UK Biobank and Kaiser GERA cohorts.

    Wittelab/pancancer_pleiotropy’s past year of commit activity
    15 3 1 0 Updated Jul 15, 2020
  • cfdna-panel-publication Public

    Supporting material for the manuscript titled: "A machine learning approach to optimizing cell-free DNA sequencing panels: with an application to prostate cancer"

    Wittelab/cfdna-panel-publication’s past year of commit activity
    Jupyter Notebook 3 MIT 0 0 0 Updated Jul 13, 2020
  • PrCa_TWAS Public

    Scripts and Data for PrCa TWAS Project

    Wittelab/PrCa_TWAS’s past year of commit activity
    R 2 GPL-3.0 3 0 0 Updated Jul 6, 2019
  • example_cluster_job Public

    Example SGE Job (see README.txt)

    Wittelab/example_cluster_job’s past year of commit activity
    Ruby 0 0 0 0 Updated Jan 14, 2016
  • gauss Public

    GAUSS procedures

    Wittelab/gauss’s past year of commit activity
    GAP 0 0 0 0 Updated Jan 13, 2015
  • glimmix Public

    Multilevel Modeling in Epidemiology with GLIMMIX

    Wittelab/glimmix’s past year of commit activity
    SAS 1 0 0 0 Updated Jan 13, 2015
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