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Zuber lab

4 followers
Vienna, Austria
https://www.imp.ac.at/research/research-groups/johannes-zuber/research/

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crispr-mageck-nf crispr-mageck-nf Public

Analyze CRISPR and shRNA functional genetic screening data

R 10 5
crispr-process-nf crispr-process-nf Public

Process CRISPR and shRNA functional genetic screening data

Nextflow 3 1

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Showing 10 of 11 repositories

dual-crispr-process-nf Public
Process dual-sgRNA CRISPR functional genetic screening data.

ZuberLab/dual-crispr-process-nf’s past year of commit activity

Nextflow 0 MIT 2 0 0 Updated May 8, 2025
crispr-mageck-nf Public
Analyze CRISPR and shRNA functional genetic screening data

ZuberLab/crispr-mageck-nf’s past year of commit activity

R 10 MIT 5 1 0 Updated Mar 25, 2025
vbcf-nf Public
Retrieve Files from VBCF Sequencing Facility

ZuberLab/vbcf-nf’s past year of commit activity

Nextflow 1 MIT 1 0 0 Updated Feb 7, 2025
crispr-process-nf Public
Process CRISPR and shRNA functional genetic screening data

ZuberLab/crispr-process-nf’s past year of commit activity

Nextflow 3 MIT 1 1 0 Updated Feb 4, 2025
Containers Public
Repository of Makefiles for Docker containers

ZuberLab/Containers’s past year of commit activity

Dockerfile 0 AGPL-3.0 1 0 0 Updated Apr 13, 2020
crisprepo-shiny Public
Shiny frontend for browsing screening data

ZuberLab/crisprepo-shiny’s past year of commit activity

R 1 AGPL-3.0 0 0 0 Updated Jul 6, 2018
crispr-nf Public
Pre-processing of multiplexed CRISPR / shRNA Screens (deprecated)

ZuberLab/crispr-nf’s past year of commit activity

Nextflow 2 MIT 2 1 0 Updated Apr 23, 2018
mageck-nf Public
Statistical Analysis of multiplexed CRISPR / shRNA Screens using MAGeCK (deprecated)

ZuberLab/mageck-nf’s past year of commit activity

R 3 MIT 0 0 0 Updated Apr 23, 2018
guidemapper-nf Public
Annotate CRISPR and shRNA screening libraries

ZuberLab/guidemapper-nf’s past year of commit activity

R 1 MIT 0 0 0 Updated Apr 11, 2018
sra-nf Public
Download Raw Reads from SRA Archive

ZuberLab/sra-nf’s past year of commit activity

Nextflow 0 MIT 0 0 0 Updated Feb 8, 2018

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