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  1. PPIRef PPIRef Public

    Dataset and package for working with protein-protein interactions in 3D

    Jupyter Notebook 86 8

  2. PPIformer PPIformer Public

    Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)

    Jupyter Notebook 47 4

  3. mutils mutils Public

    Mutation utilities for protein design

    Jupyter Notebook 4 1

  4. ProteinTTT ProteinTTT Public

    Training on test proteins improves fitness, structure, and function prediction

    7

  5. pluskal-lab/MassSpecGym pluskal-lab/MassSpecGym Public

    MassSpecGym: A benchmark for the discovery and identification of molecules (NeurIPS 2024 Spotlight)

    Jupyter Notebook 35 5

  6. pluskal-lab/DreaMS pluskal-lab/DreaMS Public

    Deep Representations Empowering the Annotation of Mass Spectra

    Jupyter Notebook 21 7