SILVA branded fork of the original wasabi This fork of wasabi provides changes made to the wasabi instance in use by the SILVA team.
Web-based environment for evolutionary sequence analysis and data visualisation.
Wasabi visualises sequence data together with a phylogenetic tree within a modern, user-friendly interface.
It automatically stores intermediate analysis steps with data sharing links and is extendable with plugins.
Replace SITE_URL and SITE_ID in javascript/matomo.js with the correct values for the Matomo server.
The original version of wasabi is available at wasabi source For more information on the original tool visit Wasabi homepage or read the publication.
Wasabi can run both as a web service or standalone application, depending on the network setup
(web browser access by outside world).
- Basic mode: open
index.htmlin Wasabi folder - Full mode: launch server module
python wasabi_server.py
To cite Wasabi in publications, please use:
Veidenberg, A., Medlar, A. and Löytynoja, A. (2015) Wasabi: an integrated platform for evolutionary sequence analysis and data visualisation. Mol. Biol. Evol.
Wasabi is open-source and licenced under the AGPL licence: GNU homepage.