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Prepare for release v1.1.8 (#35)
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lcoombe authored Oct 18, 2024
1 parent 4af28ec commit 718e144
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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -21,7 +21,7 @@ conda install -c conda-forge -c bioconda mtgrasp
### Installation from the source code
1. Download mtGrasp package

You can download the latest version of the tarball file [here](https://github.com/bcgsc/mtGrasp/releases/download/v1.1.7/mtGrasp-v1.1.7.tar.gz).
You can download the latest version of the tarball file [here](https://github.com/bcgsc/mtGrasp/releases/download/v1.1.8/mtGrasp-v1.1.8.tar.gz).


2. Add the mtGrasp directory to your PATH, use the following command to check if it is added correctly
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2 changes: 1 addition & 1 deletion mtgrasp.py
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import shlex
import sys

MTGRASP_VERSION = 'mtGrasp v1.1.7'
MTGRASP_VERSION = 'mtGrasp v1.1.8'

parser = argparse.ArgumentParser(description='mtGrasp: de novo assembly of reference-grade animal mitochondrial genomes')
parser.add_argument('-r1', '--read1', help='Full path to forward read fastq.gz file [Required]')
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2 changes: 1 addition & 1 deletion mtgrasp.smk
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# Snakemake file for mtGrasp pipeline
mtgrasp_version = 'v1.1.7'
mtgrasp_version = 'v1.1.8'


import os.path
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2 changes: 1 addition & 1 deletion mtgrasp_standardize.py
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#!/usr/bin/env python3
mtgrasp_version = 'v1.1.7'
mtgrasp_version = 'v1.1.8'

import argparse
import sys
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2 changes: 1 addition & 1 deletion mtgrasp_summarize.py
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'''
This script can be used to summarize mtGrasp assembly outputs by providing a text file containing the relative or complete path(s) to assembly output folder(s).
'''
mtgrasp_version = 'v1.1.7'
mtgrasp_version = 'v1.1.8'

import argparse
import os
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