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bhmagic authored Feb 18, 2022
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This code here is designed to using fluid dynamic simulation to estimate the permeability of the vasculature structure.

## How to use
There are 4 steps, and the reason is the simulation is very computationally heavy, thus the simulation part was designed to run on HPC with others parts can be finished on a workstation computer.
There are 3 steps, and the reason is the simulation is very computationally heavy, thus the simulation part was designed to run on HPC with others parts can be finished on a workstation computer.

Step 1: Open *RUN_THIS_FILE.m* inside *001_Preparing* folder in Matlab. Edit *dir_root* to locate your data folder. Run the file. The code will give you a *.mat* file named by your data folder.

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