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@boecker-lab

Chair of Bioinformatics Jena

Official github of the Chair of Bioinformatics at FSU Jena (Sebastian Böcker)

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  1. passatuto passatuto Public

    source code of passatuto by Kerstin Scheubert

    Java 10 1

  2. standardizeUtils standardizeUtils Public

    A Python package for standardizing SMILES and InChI strings with RDKit and PubChem

    Python 6 1

  3. myopic-mces-data myopic-mces-data Public

    Python 5 1

  4. docs.sirius.github.io docs.sirius.github.io Public archive

    4 4

  5. Rsirius Rsirius Public archive

    sirius-apis

    R 3

  6. twosteprt twosteprt Public

    Python 2

Repositories

Showing 10 of 14 repositories
  • cbc-java Public

    Java JNI library to call coin-or cbc solver from java. Packages platform dependent JNI libs as separate jars.

    boecker-lab/cbc-java’s past year of commit activity
    Java 1 0 0 0 Updated Mar 14, 2025
  • coin-or-clp-java-api Public

    ILP solver API for FragTree computation using the coin-or CLP library

    boecker-lab/coin-or-clp-java-api’s past year of commit activity
    JetBrains MPS 0 EPL-1.0 1 0 0 Updated Mar 14, 2025
  • twosteprt Public
    boecker-lab/twosteprt’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Jan 27, 2025
  • standardizeUtils Public

    A Python package for standardizing SMILES and InChI strings with RDKit and PubChem

    boecker-lab/standardizeUtils’s past year of commit activity
    Python 6 1 0 0 Updated Oct 21, 2024
  • myopic-mces Public Forked from AlBi-HHU/myopic-mces

    Computation of myopic MCES distance

    boecker-lab/myopic-mces’s past year of commit activity
    Python 1 MIT 6 0 0 Updated Oct 8, 2024
  • myopic-mces-data Public
    boecker-lab/myopic-mces-data’s past year of commit activity
    Python 5 1 0 0 Updated Sep 21, 2024
  • docs.sirius.github.io Public archive
    boecker-lab/docs.sirius.github.io’s past year of commit activity
    4 4 0 0 Updated Sep 6, 2024
  • ftree-msn Public

    Java code for MSn fragmentation tree computation as described in Scheubert et al.: https://doi.org/10.1007/978-3-662-44753-6_17

    boecker-lab/ftree-msn’s past year of commit activity
    Java 0 LGPL-3.0 1 0 0 Updated Apr 21, 2021
  • Rsirius Public archive

    sirius-apis

    boecker-lab/Rsirius’s past year of commit activity
    R 3 MIT 0 0 0 Updated Oct 28, 2020
  • gecko Public

    The official repository of the gecko gene cluster software

    boecker-lab/gecko’s past year of commit activity
    Java 1 LGPL-3.0 1 0 0 Updated Nov 5, 2018
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