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Adds fixture to download atlases for test_validation.py (#498)
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from pathlib import Path | ||
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import pytest | ||
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from brainglobe_atlasapi import BrainGlobeAtlas | ||
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@pytest.fixture(autouse=True) | ||
def setup_preexisting_local_atlases(): | ||
"""Automatically setup all tests to have three downloaded atlases | ||
in the test user data.""" | ||
preexisting_atlases = [ | ||
("example_mouse_100um", "v1.2"), | ||
("allen_mouse_100um", "v1.2"), | ||
("kim_dev_mouse_e11-5_mri-adc_31.5um", "v1.3"), | ||
] | ||
for atlas_name, version in preexisting_atlases: | ||
if not Path.exists( | ||
Path.home() / f".brainglobe/{atlas_name}_{version}" | ||
): | ||
_ = BrainGlobeAtlas(atlas_name) |