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reproducing with updated dependencies #36

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merged 17 commits into from
May 15, 2023

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alxndrkalinin
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  • updated environments compatible with Apple silicon (cannot install using environment.yml #34)
  • refactored code to be compatible with updated dependencies
  • reproduced all analysis, except for single cell Cell Health data
  • added black formatting, with github actions and pre-commit

@alxndrkalinin
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Happy new year @gwaybio! I wanted to confirm that you're not going to review PRs for this repo, only for cytominer-eval, and I can merge without review.

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gwaybio commented Jan 19, 2023

I view this repo as entirely handed over to you for your preferred maintenance plan. I don't have time for full scale reviews, but I'd be happy to offer my eyes for targeted requests. Thanks for clarifying!

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Sounds good, thanks!

@alxndrkalinin alxndrkalinin merged commit 9489ca5 into broadinstitute:main May 15, 2023
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2 participants