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igraph is now a required dependency
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Original file line number | Diff line number | Diff line change |
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@@ -12,41 +12,38 @@ jobs: | |
- "3.10" | ||
- "3.11" | ||
# - "3.12" | ||
igraph: ["igraph", "no-igraph"] | ||
steps: | ||
# This cancels any such job that is still runnning | ||
- name: Cancel Previous Runs | ||
uses: styfle/[email protected] | ||
with: | ||
access_token: ${{ github.token }} | ||
- uses: actions/checkout@v2 | ||
- name: Set up Python ${{ matrix.python-version }} | ||
uses: actions/setup-python@v2 | ||
with: | ||
python-version: ${{ matrix.python-version }} | ||
- name: Install Linux libraries | ||
run: | | ||
sudo apt-get install -y libdbus-1-3 libxkbcommon-x11-0 libxcb-icccm4 \ | ||
libxcb-image0 libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 \ | ||
libxcb-xinerama0 libxcb-xinput0 libxcb-xfixes0 graphviz graphviz-dev | ||
- name: Install dependencies | ||
run: | | ||
pip install --upgrade pip | ||
pip install zstandard==0.16.0 | ||
pip install numpy | ||
pip install flybrains --no-deps | ||
pip install git+https://github.com/siavashk/pycpd@master | ||
pip install k3d | ||
pip install pyarrow | ||
- name: Install navis | ||
run: pip install -e .[dev,vispy-pyqt5,pathos,cloudvolume] | ||
- run: pip install python-igraph | ||
if: ${{ matrix.igraph == 'igraph' }} | ||
- name: Report dependency versions | ||
run: pip freeze -r requirements.txt | ||
- name: Test | ||
uses: GabrielBB/xvfb-action@v1 | ||
with: | ||
- name: Cancel Previous Runs | ||
uses: styfle/[email protected] | ||
with: | ||
access_token: ${{ github.token }} | ||
- uses: actions/checkout@v2 | ||
- name: Set up Python ${{ matrix.python-version }} | ||
uses: actions/setup-python@v2 | ||
with: | ||
python-version: ${{ matrix.python-version }} | ||
- name: Install Linux libraries | ||
run: | | ||
export NAVIS_HEADLESS=TRUE | ||
pytest --verbose | ||
sudo apt-get install -y libdbus-1-3 libxkbcommon-x11-0 libxcb-icccm4 \ | ||
libxcb-image0 libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 \ | ||
libxcb-xinerama0 libxcb-xinput0 libxcb-xfixes0 graphviz graphviz-dev | ||
- name: Install dependencies | ||
run: | | ||
pip install --upgrade pip | ||
pip install zstandard==0.16.0 | ||
pip install numpy | ||
pip install flybrains --no-deps | ||
pip install git+https://github.com/siavashk/pycpd@master | ||
pip install k3d | ||
pip install pyarrow | ||
- name: Install navis | ||
run: pip install -e .[dev,vispy-pyqt5,pathos,cloudvolume] | ||
- name: Report dependency versions | ||
run: pip freeze -r requirements.txt | ||
- name: Test | ||
uses: GabrielBB/xvfb-action@v1 | ||
with: | ||
run: | | ||
export NAVIS_HEADLESS=TRUE | ||
pytest --verbose |
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