add fastqc, spades, and trimmomatics from bioconda

czi-catalystproject · May 31, 2024 · e742073 · e742073
1 parent e7ef0d0
commit e742073
Showing 1 changed file with 5 additions and 0 deletions.
diff --git a/image/environment.yml b/image/environment.yml
@@ -1,4 +1,5 @@
 channels:
+  - bioconda
   - conda-forge
 dependencies:
   - gh-scoped-creds
@@ -11,3 +12,7 @@ dependencies:
   - jupyterhub-singleuser
   - numpy
   - matplotlib
+  - pandas
+  - fastqc
+  - spades
+  - trimmomatic