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  1. SarcAsM SarcAsM Public

    A Python package for AI-based comprehensive analysis of sarcomere structure and function in cardiomyocytes

    Python 2

  2. bio-image-unet bio-image-unet Public

    Implementation of U-Net, U-Net++, and 3D U-Net in PyTorch for analysis of bio-images

    Python 5

  3. DeepProjection DeepProjection Public

    Trainable 2D projection of 3D microscopy stacks using deep learning

    Jupyter Notebook 8

  4. yokogawa-cv8000-compiler yokogawa-cv8000-compiler Public

    Process and compile Yokogawa CV8000 imaging data into organized, analysis-ready stacks for each field of view-no proprietary software required.

    Python 1