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Dan Ofer edited this page Oct 11, 2016
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Welcome to the asap wiki!
For a quick tutorial read: https://github.com/ddofer/asap/wiki/Getting-Started:-A-Basic-Tutorial
If you use our tool, or code, please cite us: Brandes, N., Ofer, D., & Linial, M. (2016). ASAP: a machine learning framework for local protein properties. Database: The Journal of Biological Databases and Curation, 2016, baw133. http://doi.org/10.1093/database/baw133
Check out Cleavepred's Website: http://protonet.cs.huji.ac.il/cleavepred
For tools to extract features from whole protein sequences, try ProFET: https://github.com/ddofer/ProFET
If you want to predict NeuroPeptides and their Precursors, try NeuroPID: http://neuropid.cs.huji.ac.il/