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@emo-bon

EMO BON

European Marine Omics Biodiversity Observation Network (EMBRC)

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  1. MetaGOflow MetaGOflow Public

    Forked from EBI-Metagenomics/pipeline-v5

    MGnify oriented implementation for the Marine Genomic Observatories oriented pipeline, developed in the framework of an EOSC-Life funded project

    Python 9 8

  2. hackathon2022 hackathon2022 Public

    Tutorials and further material for the "Learning Data Management and Workflow Analyses: a hackathon from the EMBRC’s EMO BON (marine metagenomics) project" hackathon

    Common Workflow Language

  3. governance-crate governance-crate Public

    Holds the governance content for the emo-bon data management

  4. sequencing-crate sequencing-crate Public

    The files controlling and describing the sequencing metadata

    2

  5. emobon-dm-tools emobon-dm-tools Public

    Collection of scripts and tricks that help automate collecting / formatting / checking the data from the observatories

    Python

  6. emo-bon.github.io emo-bon.github.io Public

    For the data landing page

Repositories

Showing 10 of 50 repositories
  • momics-demos Public

    Marine omics platform NBs

    emo-bon/momics-demos’s past year of commit activity
    Jupyter Notebook 0 MIT 0 6 (1 issue needs help) 0 Updated Apr 4, 2025
  • marine-omics-methods Public

    Package of utilities for FAIR-Ease demo pipelines

    emo-bon/marine-omics-methods’s past year of commit activity
    Python 0 MIT 0 2 (1 issue needs help) 0 Updated Apr 4, 2025
  • metagoflow-data-products-ro-crate Public

    Code to create RO-Crates for MetaGOflow workflow outputs

    emo-bon/metagoflow-data-products-ro-crate’s past year of commit activity
    Python 0 CC-BY-4.0 0 2 0 Updated Apr 3, 2025
  • analysis-results-uplifting-docker Public

    dockerised executor of the sema.subyt uplifting for the analysis results

    emo-bon/analysis-results-uplifting-docker’s past year of commit activity
    Python 0 MIT 0 11 0 Updated Apr 3, 2025
  • data-quality-control-action Public

    Action to run the QC on the EMO BON logsheets and transform them

    emo-bon/data-quality-control-action’s past year of commit activity
    Python 0 0 13 0 Updated Apr 1, 2025
  • observatory-roskogo-crate Public

    EMO BON observatory - logsheets

    emo-bon/observatory-roskogo-crate’s past year of commit activity
    0 0 6 0 Updated Apr 1, 2025
  • observatory-vb-crate Public

    EMO BON observatory - logsheets

    emo-bon/observatory-vb-crate’s past year of commit activity
    0 0 3 0 Updated Apr 1, 2025
  • observatory-oob-crate Public

    EMO BON observatory - logsheets

    emo-bon/observatory-oob-crate’s past year of commit activity
    0 0 4 0 Updated Apr 1, 2025
  • observatory-hcmr-1-crate Public

    EMO BON observatory - logsheets

    emo-bon/observatory-hcmr-1-crate’s past year of commit activity
    Roff 0 0 5 0 Updated Apr 1, 2025
  • observatory-iuieilat-crate Public

    EMO BON observatory - logsheets

    emo-bon/observatory-iuieilat-crate’s past year of commit activity
    0 0 4 0 Updated Apr 1, 2025

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