reform structure

fayazahamed007 · Apr 3, 2023 · f9641fb · f9641fb
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diff --git a/README.md b/README.md
@@ -47,10 +47,8 @@ We provide our pre-trained BioGPT model checkpoints along with fine-tuned checkp
 |----|----|---|---|
 |BioGPT|Pre-trained BioGPT model checkpoint|[link](https://msramllasc.blob.core.windows.net/modelrelease/BioGPT/checkpoints/Pre-trained-BioGPT.tgz)|[link](https://huggingface.co/microsoft/biogpt)|
 |BioGPT-Large|Pre-trained BioGPT-Large model checkpoint|[link](https://msramllasc.blob.core.windows.net/modelrelease/BioGPT/checkpoints/Pre-trained-BioGPT-Large.tgz)|[link](https://huggingface.co/microsoft/biogpt-large)|
-|BioGPT-QA-PubMedQA-BioGPT-ResoningFree|Fine-tuned BioGPT for question answering task on PubMedQA reasoning free setting|[link](https://msralaphilly2.blob.core.windows.net/release/BioGPT/checkpoints/QA-PubMedQA-BioGPT-ReasoningFree.tgz)| |
-|BioGPT-QA-PubMedQA-BioGPT-ResoningRequired|Fine-tuned BioGPT for question answering task on PubMedQA reasoning required setting|[link](https://msralaphilly2.blob.core.windows.net/release/BioGPT/checkpoints/QA-PubMedQA-BioGPT-ReasoningRequired.tgz)| |
-|BioGPT-QA-PubMEDQA-BioGPT-Large-ReasoningFree|Fine-tuned BioGPT-Large for question answering task on PubMedQA reasoning free setting|[link](https://msralaphilly2.blob.core.windows.net/release/BioGPT/checkpoints/QA-PubMedQA-BioGPT-Large-ReasoningFree.tgz)|[link](https://huggingface.co/microsoft/biogpt-large-pubmedqa)|
-|BioGPT-QA-PubMEDQA-BioGPT-Large-ReasoningRequired|Fine-tuned BioGPT-Large for question answering task on PubMedQA reasoning required setting|[link](https://msralaphilly2.blob.core.windows.net/release/BioGPT/checkpoints/QA-PubMedQA-BioGPT-Large-ReasoningRequired.tgz)||
+|BioGPT-QA-PubMedQA-BioGPT|Fine-tuned BioGPT for question answering task on PubMedQA|[link](https://msralaphilly2.blob.core.windows.net/release/BioGPT/checkpoints/QA-PubMedQA-BioGPT.tgz)| |
+|BioGPT-QA-PubMedQA-BioGPT-Large|Fine-tuned BioGPT-Large for question answering task on PubMedQA|[link](https://msralaphilly2.blob.core.windows.net/release/BioGPT/checkpoints/QA-PubMedQA-BioGPT-Large.tgz)||
 |BioGPT-RE-BC5CDR|Fine-tuned BioGPT for relation extraction task on BC5CDR|[link](https://msramllasc.blob.core.windows.net/modelrelease/BioGPT/checkpoints/RE-BC5CDR-BioGPT.tgz)| |
 |BioGPT-RE-DDI|Fine-tuned BioGPT for relation extraction task on DDI|[link](https://msramllasc.blob.core.windows.net/modelrelease/BioGPT/checkpoints/RE-DDI-BioGPT.tgz)| |
 |BioGPT-RE-DTI|Fine-tuned BioGPT for relation extraction task on KD-DTI|[link](https://msramllasc.blob.core.windows.net/modelrelease/BioGPT/checkpoints/RE-DTI-BioGPT.tgz)| |

diff --git a/data/PubMedQA/raw/test.tsv b/data/PubMedQA/raw/test.tsv
diff --git a/data/PubMedQA/raw/train.tsv b/data/PubMedQA/raw/train.tsv
diff --git a/data/PubMedQA/raw/valid.tsv b/data/PubMedQA/raw/valid.tsv
diff --git a/...s/QA-PubMedQA/ReasoningRequired/README.md → examples/QA-PubMedQA/README.md b/...s/QA-PubMedQA/ReasoningRequired/README.md → examples/QA-PubMedQA/README.md
diff --git a/examples/QA-PubMedQA/ReasoningFree/README.md b/examples/QA-PubMedQA/ReasoningFree/README.md
diff --git a/examples/QA-PubMedQA/ReasoningFree/infer.sh b/examples/QA-PubMedQA/ReasoningFree/infer.sh
diff --git a/examples/QA-PubMedQA/ReasoningFree/infer_large.sh b/examples/QA-PubMedQA/ReasoningFree/infer_large.sh
diff --git a/examples/QA-PubMedQA/ReasoningFree/preprocess.sh b/examples/QA-PubMedQA/ReasoningFree/preprocess.sh
diff --git a/examples/QA-PubMedQA/ReasoningFree/preprocess_large.sh b/examples/QA-PubMedQA/ReasoningFree/preprocess_large.sh
diff --git a/examples/QA-PubMedQA/ReasoningFree/rebuild_data.py b/examples/QA-PubMedQA/ReasoningFree/rebuild_data.py
diff --git a/examples/QA-PubMedQA/ReasoningFree/rebuild_data_large.py b/examples/QA-PubMedQA/ReasoningFree/rebuild_data_large.py
diff --git a/examples/QA-PubMedQA/ReasoningFree/train.sh b/examples/QA-PubMedQA/ReasoningFree/train.sh
diff --git a/examples/QA-PubMedQA/ReasoningFree/train_large.sh b/examples/QA-PubMedQA/ReasoningFree/train_large.sh