Requested Data Sets of GeneNetwork

Requested Data Resources Table

Data sets we want to enter into GN

Started March 27, 2019 (R Williams)

To do: add Species

Index	Nominated by	Nominated Date	GN Menu Type Name	Data Source and Date	Systems	GEO Set ID	Data Type	Sex	Stage Age	Treatment	GN IDs	N	PMID	Trait Rows	Population	N QTLs LOD>5	Highest LRS	Conact Notes	Contact
1	Hypothalamus	Williams, Rob	26/03/2019	UCLA 2016	nervous system, brain	GSE79551	RNAseq	both	adult	control	XXX	99	27623010	XXX	HMDP, BXD, AXB/BXA, etc	NA	NA	contacted by email Mar 26, 2019	Yehudit Hasin-Brumshtein [email protected]
2	Phenotype	Williams, Rob	26/03/2019	UCLA 2018	liver, genomics	NA	antisense oligomers targeting Malat1	both	adult	AOS tx	XXX	99	30372444	XXX	See Fig 1A; HMDP, BXD, AXB/BXA, etc	NA	NA	contacted by email Mar 26, 2019	Richard G Lee [email protected]
3	Liver	Williams, Rob	26/03/2019	UCLA 2019	liver, lipidomics, proteomics	NA	proteomics, lipidomics	male	young adult	control	XXX	107	30814737	4311	HMDP, BXD, AXB/BXA, etc	NA	NA	not contacted yet, probably at least two separate data sets, one for lipids, one for proteins	Thomas Vallim [email protected]
4	ALL	Williams, Rob	30/03/2019	GTEx V7	all tissues	NA	mRNA	both	adult	control	XXX	XXX	XXXXXX	XXXXX	human	NA	NA	download from GTex Portal	NA