SEB Mini-project

Research Phase

• Find a good metric for testing different spieces against one another
• Decide on different enviroments to be tested

Coding Phase

• Matlab Differential Equations:
  • Aim: To have simple equations which dictate the behaviour of the cell when nitrogen/carbon/sunlight are altered
• Smoldyn Model:
  • Aim: To represent the diffusion across different cells of the nitrogen.
• F# model:
  • Aim: to have a model which represents the growth of the cluster of cells
  • Tasks:
    • compile the existing code for the Hybrid Modelling tool
    • test the existing code for any further issues
    • try to alter the size parameter in the hybrid testing model to instead represent nitrogen content.

Quick thing on how to use git

how to push to git

• git add < file.name >
• git commit -m '< message > '
• git push

how to pull from git

• cd SEBminiproject (from your home directory)
• git pull

If it doesn't let you do either of those things there is probably a conflict

• do a diff by typing git diff
• enter the files it says are conflicted and remove the conflict/resolve the conflict
• do a git merge
• then do a git pull
• git push

GrandBudapest <- c( "#5B5EA6", "#DD4124","#009B77", "#EFC050", "#9B2335", "#DFCFBE","#D65076", "#55B4B0", "#E15D44", "#7FCDCD", "#BC243C", "#C3447A" )

library(colorspace)

colfunc <- colorRampPalette(c(< First color >,< Second color >)) pal1 <- colfunc(< no of colours >)