Skip to content

Try out powerfit in web browser #2

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Draft
wants to merge 4 commits into
base: master
Choose a base branch
from
Draft

Try out powerfit in web browser #2

wants to merge 4 commits into from

Conversation

sverhoeven
Copy link

Takes about 35 seconds to run powerfit ribosome-KsgA.map 13 KsgA.pdb -a 20 -l equivalent on single thread in web browser

To test use haddocking/powerfit#32 branch of powerfit

The results are different but it runs.

The console output is

(128, 128, 128)
pyodide.asm.js:10 [PosixPath('ribosome-KsgA.map'), PosixPath('KsgA.pdb'), PosixPath('_lcc_part_1.npy'), PosixPath('_rot_part_1.npy'), PosixPath('lcc.mrc'), PosixPath('solutions.out'), PosixPath('fit_1.pdb'), PosixPath('fit_2.pdb'), PosixPath('fit_3.pdb'), PosixPath('fit_4.pdb'), PosixPath('fit_5.pdb')]
pyodide.asm.js:10 #rank      cc Fish-z  rel-z        x        y        z    a11    a12    a13    a21    a22    a23    a31    a32    a33
pyodide.asm.js:10 1       0.235  0.240  9.710  162.500  113.750  185.250  0.000 -0.797 -0.604  0.000  0.604 -0.797  1.000  0.000  0.000
pyodide.asm.js:10 2       0.227  0.231  9.361  195.000  195.000  204.750 -0.000  0.000 -1.000  0.000 -1.000 -0.000 -1.000  0.000 -0.000
pyodide.asm.js:10 3       0.218  0.221  8.947  149.500  139.750  172.250 -0.000  0.000  1.000  0.000  1.000  0.000 -1.000  0.000 -0.000
pyodide.asm.js:10 4       0.217  0.220  8.909  162.500  172.250  217.750 -0.258  0.362 -0.896 -0.362 -0.896 -0.258 -0.896  0.258  0.362
pyodide.asm.js:10 5       0.214  0.218  8.813  208.000  227.500  227.500 -0.548 -0.184 -0.816 -0.548  0.816  0.184  0.632  0.548 -0.548
pyodide.asm.js:10 6       0.214  0.217  8.796  237.250  156.000  188.500  0.548  0.632  0.548 -0.816  0.548  0.184 -0.184 -0.548  0.816
pyodide.asm.js:10 7       0.212  0.216  8.730  165.750  136.500  185.250 -0.000  1.000  0.000  1.000 -0.000  0.000  0.000  0.000 -1.000
pyodide.asm.js:10 8       0.211  0.214  8.677  224.250  149.500  191.750 -1.000  0.000  0.000  0.000 -1.000  0.000  0.000  0.000  1.000
pyodide.asm.js:10 9       0.211  0.214  8.665  234.000  159.250  195.000  1.000  0.000  0.000  0.000  1.000  0.000  0.000  0.000  1.000
pyodide.asm.js:10 10      0.210  0.214  8.639  175.500  227.500  159.250 -0.604 -0.797  0.000  0.000  0.000 -1.000  0.797 -0.604  0.000
...
default: 36235.5439453125 ms

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant