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Add an ini for single sample no indel realign
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@kduyvesteyn
kduyvesteyn committed Apr 11, 2019
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17 changes: 17 additions & 0 deletions settings/SingleSampleNoRealign.ini
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INIFILE settings/include/settings.ini

MAPPING yes
INDEL_REALIGNMENT no

POSTSTATS yes
DAMAGE_ESTIMATE yes

GERMLINE_CALLING yes

STRELKA no
AMBER no
COBALT no
PURPLE no
GRIDSS no

HEALTHCHECK yes

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