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Meditron is a suite of open-source medical Large Language Models (LLMs).

Python 2,018 194 Updated Apr 10, 2024

RNA-seq prediction with deep convolutional neural networks.

Python 146 17 Updated Mar 27, 2025

DNS-Blocklists: For a better internet - keep the internet clean!

Text 11,078 355 Updated May 5, 2025

Use LLMs and LLM Vision (OCR) to handle paperless-ngx - Document Digitalization powered by AI

Go 845 42 Updated May 5, 2025

A collection of modern/faster/saner alternatives to common unix commands.

31,909 800 Updated Sep 10, 2024

Chai-1, SOTA model for biomolecular structure prediction

Python 1,619 209 Updated May 1, 2025
Python 4,408 460 Updated Jul 25, 2024

Causal Inference for the Brave and True. A light-hearted yet rigorous approach to learning about impact estimation and causality.

Jupyter Notebook 2,932 533 Updated Dec 9, 2024

Statistical Rethinking course winter 2022

R 4,112 443 Updated Mar 15, 2022

This repository contains data on Coronavirus Disease 2019 (COVID-19) in New York City (NYC), from the NYC Department of Health and Mental Hygiene.

959 649 Updated May 1, 2025

PRML algorithms implemented in Python

Jupyter Notebook 11,579 3,251 Updated Apr 5, 2025

Oh my tmux! My self-contained, pretty & versatile tmux configuration made with 💛🩷💙🖤❤️🤍

Shell 22,919 3,419 Updated Apr 2, 2025

Python development config

Vim Script 751 86 Updated Jul 9, 2020

Highlight points and lines in ggplot2

R 524 23 Updated Sep 6, 2024

simple tools for data cleaning in R

R 1,410 132 Updated Dec 23, 2024

collection of notebooks with different cytoscape workflows

HTML 49 36 Updated Mar 22, 2023

Template for writing a PhD thesis in Markdown

HTML 1,231 561 Updated May 23, 2023

Directory of tutorials and open-source code repositories for working with Keras, the Python deep learning library

3,251 884 Updated Feb 12, 2024

A list of deep learning implementations in biology

2,053 484 Updated Aug 10, 2024

A technical report on convolution arithmetic in the context of deep learning

TeX 14,312 2,290 Updated Jun 8, 2023

Lightweight and Fast; RNA-seq quantification at the event-level

Julia 111 22 Updated Dec 12, 2023

An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

R 792 159 Updated Aug 4, 2024

120+ interactive Python coding interview challenges (algorithms and data structures). Includes Anki flashcards.

Python 30,198 4,533 Updated May 8, 2024

TensorFlow Tutorial and Examples for Beginners (support TF v1 & v2)

Jupyter Notebook 43,618 14,894 Updated Jul 26, 2024

Bioconductor package "polyester", devel version. RNA-seq read simulator.

R 94 51 Updated Sep 14, 2021

Advanced R: a book

TeX 2,398 1,711 Updated Mar 13, 2025

Algorithms implemented in Python

Python 280 120 Updated Feb 2, 2023

a cythonized, extended version of the interval search tree in bx

Python 30 7 Updated Jun 4, 2019

aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)

Jupyter Notebook 27,347 7,921 Updated Jun 25, 2024

Python FASTA sequence parser

Python 3 1 Updated Aug 21, 2012
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