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agr_prototype
agr_prototype PublicForked from alliance-genome/agr_archive_initial_prototype
A Prototype for the Alliance of Genome Resources Web Portal
JavaScript
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1,017 contributions in the last year
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Contribution activity
April 2025
Created 49 commits in 12 repositories
Created a pull request in monarch-initiative/monarch-app that received 2 comments
Show variant to phenotype associations on node pages
We didn't have SequenceVariantToPhenotypicFeatureAssociation called out specifically in the yaml that controls which associations are shown on node…
+341
−332
lines changed
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2
comments
Opened 5 other pull requests in 5 repositories
monarch-initiative/closurizer
1
open
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replaces hardcoded has_phenotype with setting up a join for each predicate that gets a node expansion
This contribution was made on Apr 16
monarch-initiative/monarch-ingest
1
open
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Draft/experimental PR to include multiomics drug to disease edges"
This contribution was made on Apr 16
monarch-initiative/monarch-app
1
merged
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frontend linting fixes
This contribution was made on Apr 10
monarch-initiative/monarch-qc
1
merged
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Add missing node examples for dangling edges
This contribution was made on Apr 9
monarch-initiative/ontotools-docker
1
merged
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run ols-frontend detached in runols.sh
This contribution was made on Apr 4
Reviewed 7 pull requests in 5 repositories
everycure-org/matrix-validator
3 pull requests
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adding new required columns
This contribution was made on Apr 3
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Allow supplemental prefixes
This contribution was made on Apr 3
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catching Superfluous column errors and logging at end of respective v…
This contribution was made on Apr 3
linkml/linkml
1 pull request
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rollup transformer implementation #2568
This contribution was made on Apr 14
monarch-initiative/mic-ingest
1 pull request
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Update OntoGPT, lock and .gitignore
This contribution was made on Apr 9
monarch-initiative/ontotools-docker
1 pull request
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set heap space for ols-web
This contribution was made on Apr 4
monarch-initiative/clingen-ingest
1 pull request
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Use CAID prefix for allele registry identifiers
This contribution was made on Apr 2
Created an issue in Knowledge-Graph-Hub/kg-phenio that received 1 comment
part_of predicates ending up as related_to
@ptgolden and I are looking at our hierarchy display on the site, and realized that we can't display part_of associations in the UI yet, because th…
1
comment
Opened 6 other issues in 3 repositories
monarch-initiative/monarch-app
4
open
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Use only
P
aspect for phenotypes in phenotype.hpoa ingest, capture onset and others with appropriate predicatesThis contribution was made on Apr 14 -
Add the ability to drill down and see normalization failure examples on the QC dashboard
This contribution was made on Apr 9
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Support for Xiphophorus disease model and phenotype associations
This contribution was made on Apr 4
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Capture SO terms in the
type
column as missing phenio nodes during ingest QC processThis contribution was made on Apr 4
INCATools/ontology-access-kit
1
open
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similarity compare fails on CLI using
-set1-file
&-set2-file
args with complaint about missing@
This contribution was made on Apr 11
NCATSTranslator/Data-Ingest-Coordination-Working-Group
1
open
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Create a G2P Annotations Reference Ingest Guide
This contribution was made on Apr 8
7
contributions
in private repositories
Apr 8 – Apr 16