You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Since I prefer to fix problems instead of complaining I tried to compile the latest version of K8 myself. This way I could figure out how to make a conda-forge K8 recipe. The idea was that I could add this to the bioconda recipe for BWA and as such package the BWAKIT in an accessible form.
Unfortunately I have been unsuccessfull at compiling K8. Apparently it does not work under Debian 10 or Ubuntu 16.04, at least not with the provided instructions. I would love to enable a k8 package on conda-forge to make packaging bwakit easier, but I need some more help with that.
In the meantime there is also a bioconda package for bwakit that uses the sourceforge tarballs. This also works fine. But like I said, the sourceforge tarball is a bit outdated.
What would be the best way to tackle this problem?
The text was updated successfully, but these errors were encountered:
The newest version of the BWA kit archives posted here (https://sourceforge.net/projects/bio-bwa/files/bwakit/) still uses an older version of BWA (0.7.15).
Since I prefer to fix problems instead of complaining I tried to compile the latest version of K8 myself. This way I could figure out how to make a conda-forge K8 recipe. The idea was that I could add this to the bioconda recipe for BWA and as such package the BWAKIT in an accessible form.
Unfortunately I have been unsuccessfull at compiling K8. Apparently it does not work under Debian 10 or Ubuntu 16.04, at least not with the provided instructions. I would love to enable a k8 package on conda-forge to make packaging bwakit easier, but I need some more help with that.
In the meantime there is also a bioconda package for bwakit that uses the sourceforge tarballs. This also works fine. But like I said, the sourceforge tarball is a bit outdated.
What would be the best way to tackle this problem?
The text was updated successfully, but these errors were encountered: