fixed a few naming conventions regarding the use of HODLR #228
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| name: Run Github CI tests. | |
| on: [push, pull_request] | |
| jobs: | |
| test: | |
| name: Build and test | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| compiler: | |
| - gcc | |
| test: [1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16] | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v2 | |
| - name: Install dependencies | |
| run: | | |
| export BLUE="\033[34;1m" | |
| mkdir -p installDir | |
| printf "${BLUE} YL; Installing gcc-9 via apt\n" | |
| sudo apt-get update | |
| sudo apt-get install build-essential software-properties-common -y | |
| sudo add-apt-repository ppa:ubuntu-toolchain-r/test -y | |
| sudo apt-get update | |
| sudo apt-get install gcc-9 g++-9 -y | |
| sudo update-alternatives --install /usr/bin/gcc gcc /usr/bin/gcc-9 60 --slave /usr/bin/g++ g++ /usr/bin/g++-9 | |
| export CXX="g++-9" | |
| export CC="gcc-9" | |
| printf "${BLUE} YL; Done installing gcc-9 via apt\n" | |
| printf "${BLUE} YL; Installing gfortran via apt\n" | |
| sudo apt-get install gfortran-9 -y | |
| sudo update-alternatives --install /usr/bin/gfortran gfortran /usr/bin/gfortran-9 60 | |
| printf "${BLUE} YL; Done installing gfortran via apt\n" | |
| printf "${BLUE} YL; Installing openmpi\n" | |
| sudo apt-get install openmpi-bin libopenmpi-dev | |
| printf "${BLUE} YL; Done installing openmpi\n" | |
| printf "${BLUE} YL; Installing dos2unixfrom apt\n" | |
| sudo apt-get install dos2unix | |
| printf "${BLUE} YL; Done installing dos2unixfrom apt\n" | |
| printf "${BLUE} YL; Installing BLASfrom apt\n" | |
| sudo apt-get install libblas-dev | |
| export BLAS_LIB=/usr/lib/x86_64-linux-gnu/libblas.so | |
| printf "${BLUE} YL; Done installing BLASfrom apt\n" | |
| printf "${BLUE} YL; Installing LAPACKfrom apt\n" | |
| sudo apt-get install liblapack-dev | |
| export LAPACK_LIB=/usr/lib/x86_64-linux-gnu/liblapack.so | |
| printf "${BLUE} YL; Done installing LAPACKfrom apt\n" | |
| printf "${BLUE} YL; Installing ScaLAPACK from source\n" | |
| cd $GITHUB_WORKSPACE/installDir | |
| wget http://www.netlib.org/scalapack/scalapack-2.1.0.tgz | |
| tar -xf scalapack-2.1.0.tgz | |
| cd scalapack-2.1.0 | |
| rm -rf build | |
| mkdir -p build | |
| cd build | |
| cmake .. \ | |
| -DBUILD_SHARED_LIBS=ON \ | |
| -DCMAKE_C_COMPILER=mpicc \ | |
| -DCMAKE_Fortran_COMPILER=mpif90 \ | |
| -DCMAKE_INSTALL_PREFIX=./install \ | |
| -DCMAKE_BUILD_TYPE=Release \ | |
| -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \ | |
| -DCMAKE_Fortran_FLAGS="-fopenmp" \ | |
| -DBLAS_LIBRARIES="$BLAS_LIB" \ | |
| -DLAPACK_LIBRARIES="$LAPACK_LIB" | |
| make | |
| make install | |
| export SCALAPACK_LIB="$GITHUB_WORKSPACE/installDir/scalapack-2.1.0/build/install/lib/libscalapack.so" | |
| printf "${BLUE} YL; Done installing ScaLAPACK from source\n" | |
| printf "${BLUE} YL; Installing arpack from source\n" | |
| cd $GITHUB_WORKSPACE/installDir | |
| git clone https://github.com/opencollab/arpack-ng.git | |
| cd arpack-ng | |
| rm -rf build | |
| mkdir -p build | |
| cd build | |
| cmake .. \ | |
| -DBUILD_SHARED_LIBS=ON \ | |
| -DCMAKE_C_COMPILER=mpicc \ | |
| -DCMAKE_CXX_COMPILER=mpic++ \ | |
| -DCMAKE_Fortran_COMPILER=mpif90 \ | |
| -DCMAKE_INSTALL_PREFIX=. \ | |
| -DCMAKE_BUILD_TYPE=Debug \ | |
| -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \ | |
| -DCMAKE_Fortran_FLAGS="-fopenmp" \ | |
| -DTPL_BLAS_LIBRARIES="$BLAS_LIB" \ | |
| -DTPL_LAPACK_LIBRARIES="$LAPACK_LIB" \ | |
| -DMPI=ON \ | |
| -DEXAMPLES=ON \ | |
| -DCOVERALLS=ON | |
| make | |
| export ARPACK_LIB="$GITHUB_WORKSPACE/installDir/arpack-ng/build/lib/libarpack.so;$GITHUB_WORKSPACE/installDir/arpack-ng/build/lib/libparpack.so" | |
| printf "${BLUE} YL; Done installing arpack from source\n" | |
| - name: Install package | |
| run: | | |
| export BLUE="\033[34;1m" | |
| export BLAS_LIB=/usr/lib/x86_64-linux-gnu/libblas.so | |
| export LAPACK_LIB=/usr/lib/x86_64-linux-gnu/liblapack.so | |
| export SCALAPACK_LIB="$GITHUB_WORKSPACE/installDir/scalapack-2.1.0/build/install/lib/libscalapack.so" | |
| export ARPACK_LIB="$GITHUB_WORKSPACE/installDir/arpack-ng/build/lib/libarpack.so;$GITHUB_WORKSPACE/installDir/arpack-ng/build/lib/libparpack.so" | |
| printf "${BLUE} YL; Installing ButterflyPACK from source\n" | |
| cd $GITHUB_WORKSPACE | |
| rm -rf build | |
| mkdir -p build | |
| cd build | |
| export CRAYPE_LINK_TYPE=dynamic | |
| rm -rf CMakeCache.txt | |
| rm -rf DartConfiguration.tcl | |
| rm -rf CTestTestfile.cmake | |
| rm -rf cmake_install.cmake | |
| rm -rf CMakeFiles | |
| cmake .. \ | |
| -DCMAKE_CXX_FLAGS="-fopenmp" \ | |
| -Denable_blaslib=OFF \ | |
| -DBUILD_SHARED_LIBS=OFF \ | |
| -DCMAKE_C_COMPILER=mpicc \ | |
| -DCMAKE_CXX_COMPILER=mpic++ \ | |
| -DCMAKE_Fortran_COMPILER=mpif90 \ | |
| -DCMAKE_INSTALL_PREFIX=. \ | |
| -DCMAKE_BUILD_TYPE=Debug \ | |
| -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \ | |
| -DCMAKE_Fortran_FLAGS="-fopenmp" \ | |
| -DTPL_BLAS_LIBRARIES="$BLAS_LIB" \ | |
| -DTPL_LAPACK_LIBRARIES="$LAPACK_LIB" \ | |
| -DTPL_SCALAPACK_LIBRARIES="$SCALAPACK_LIB" \ | |
| -DTPL_ARPACK_LIBRARIES="$ARPACK_LIB" | |
| make | |
| make install | |
| printf "${BLUE} YL; Done installing ButterflyPACK from source\n" | |
| - name: Test | |
| run: | | |
| cd $GITHUB_WORKSPACE | |
| export TEST_NUMBER=${{ matrix.test }} | |
| sh ./.ci_tests.sh |