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39 Open 62 Closed
39 Open 62 Closed
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Issues list

How to add read quality scores back into GAM
#107 opened Sep 29, 2024 by BaxW
GraphAligner slow on R10 reads mapped to hprc graph
#106 opened Sep 27, 2024 by xchang1
2
GraphAligner closes named pipe (feature request)
#105 opened Aug 27, 2024 by nrizzo
2
Unable to reproduce alignment speed in the GraphAligner publication
#104 opened Aug 12, 2024 by jzhang-dev
multiple mapping
#96 opened Jan 19, 2024 by yjk-bertrand
1
Incorrect alignments, assertion errors with --seedless-DP when read has a mismatch in the first base
#93 opened Oct 2, 2023 by shenker
Allow compilation with latest dependencies from conda-forge
#92 opened Oct 2, 2023 by shenker
1
Several issues about installsion version,compile,and assertion.
#91 opened Sep 19, 2023 by linsindian
Alignments jumping haplotype?
#89 opened Aug 31, 2023 by skoren
Doesn't GraphAligner support .vg graph?
#87 opened Aug 14, 2023 by tanger-code
5
unmapped reads
#86 opened Jul 13, 2023 by asylvz
1
Alignment error
#83 opened Jun 13, 2023 by GeorgeBGM
4
GAM surject incompatible with VG
#82 opened May 15, 2023 by jiadong324
3
Expected alternative alignment not shown
#78 opened Mar 7, 2023 by JianjunJin
4
Memory and threads suggested - Core dump when building minimizer seeder from the graph
#72 opened Dec 8, 2022 by lingliao
8
Can we add python to the docker image graphaligner
#71 opened Dec 2, 2022 by lingliao
GraphAligner fails with large number of threads
#68 opened Sep 30, 2022 by TanyaDvorkina
3
unspecified edge overlaps error
#65 opened Aug 1, 2022 by brianabernathy
4
CondaEnvironment_osx.yml hardcodes x86_64-specific versions of dependencies
#64 opened Jul 10, 2022 by asl
4
equivalent alignments with version 1.0.16
#63 opened Jun 29, 2022 by ZHU-XU-xmu
Mapping long reads to whole genome
#60 opened May 11, 2022 by champ1994
2
Finding % mapped reads with GraphAligner
#59 opened Apr 27, 2022 by gsc74
1
No alignment to de Bruijin Graph
#58 opened Apr 20, 2022 by khodor14
Error when mapping reads to graph.
#56 opened Apr 10, 2022 by champ1994
1
Save seed index to disk
#49 opened Dec 18, 2021 by schorlton
2
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