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miRge3.0 dev0.1.0
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@arunhpatil arunhpatil released this 05 Oct 19:45
· 22 commits to master since this release
dev0.1.0
7b0d8b4

Release 3.0.0
This release supports Python3 and has improved performance along with advanced graphics with additional features for processing small RNA data. The latest changelog for the release v0.1.0 is given below.

Changelog:

v0.1.0:

  • Introduced new feature and updated user guide for "Save and resume functions"
  • Updated user guide for "Trimming both 5’ and 3’ adapters - Linked adapters "
  • Introduced "Frequently asked questions (FAQ)" in documentation and described how to reach out
  • Introduced a fix for the recent issue "Parser.py missing AdapterParser in cutadapt"
  • Introduced a QC/check for essential files in the library and its path prior to the execution of miRge3.0 on the input samples
  • Corrected SAM flag denoting negative strand reads
  • Added print statement to display the path of the output folder upon successful completion of miRge3.0 execution
  • Introduced threshold feature for miRNA error correction package (miREC feature)

v0.0.9 :

  • Updated MANIFEST.in file to include miREC package

v0.0.8 :

  • Fixed minor bugs with bowtie phred64 parameter;
  • Included miREC an error correction package to remove ambiguous single nucleotide variations in the miRNA sequences;
  • Corrected parse options for UMI parameter;
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