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@microbiomedata

National Microbiome Data Collaborative

National Microbiome Data Collaborative

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  1. nmdc-schema nmdc-schema Public

    National Microbiome Data Collaborative (NMDC) unified data model

    Python 31 8

  2. docs docs Public

    User-facing, web-based documentation about the NMDC

    Python 1 1

Repositories

Showing 10 of 81 repositories
  • nmdc-runtime Public

    Runtime system for NMDC data management and orchestration

    microbiomedata/nmdc-runtime’s past year of commit activity
    HTML 7 5 112 (3 issues need help) 16 Updated Apr 17, 2025
  • nmdc-edge Public

    Web-based interface to the NMDC EDGE platform

    microbiomedata/nmdc-edge’s past year of commit activity
    JavaScript 4 0 79 (1 issue needs help) 0 Updated Apr 17, 2025
  • nmdc-server Public

    Data portal client and server for NMDC.

    microbiomedata/nmdc-server’s past year of commit activity
    Python 10 0 148 20 Updated Apr 17, 2025
  • nmdc_automation Public

    Prototype automation

    microbiomedata/nmdc_automation’s past year of commit activity
    Python 2 2 58 5 Updated Apr 17, 2025
  • nmdc-schema Public

    National Microbiome Data Collaborative (NMDC) unified data model

    microbiomedata/nmdc-schema’s past year of commit activity
    Python 31 CC0-1.0 8 374 (1 issue needs help) 7 Updated Apr 17, 2025
  • submission-schema Public
    microbiomedata/submission-schema’s past year of commit activity
    Python 1 MIT 1 50 7 Updated Apr 17, 2025
  • nmdc-field-notes Public

    Mobile app for metadata collection on the go

    microbiomedata/nmdc-field-notes’s past year of commit activity
    TypeScript 2 0 27 1 Updated Apr 16, 2025
  • nmdc_mass_spectrometry_metadata_generation Public

    Mass spectrometry metadata generation

    microbiomedata/nmdc_mass_spectrometry_metadata_generation’s past year of commit activity
    Python 1 0 2 0 Updated Apr 16, 2025
  • metadata-for-user-facility-template-transformations Public

    CLI tool to convert metadata submissions from the NMDC submission portal to user facility Excel templates

    microbiomedata/metadata-for-user-facility-template-transformations’s past year of commit activity
    Python 0 0 11 1 Updated Apr 16, 2025
  • metaT_ReadCounts Public

    Workflow for metatranscriptome read counting

    microbiomedata/metaT_ReadCounts’s past year of commit activity
    WDL 0 0 0 0 Updated Apr 15, 2025
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