Refactor: Fixing Tests that currently were not passing even though Op…

…enAI API key was passed

- Implement abstractmethod in dae_evaluator and refactor to new OpenAI API
- Refactor dimension function in duckdb_adapter
- test refactoring: clinwar wrapper, dae evaluator, splitter
- Fix issues with readonly database and linting

src/curate_gpt/extract/openai_extractor.py

@@ -113,7 +113,7 @@ def extract(
         logger.debug(f"RESPONSE = {response}")
         # print(response)
         choice = response.choices[0]
-        message = choice["message"]
+        message = choice.message
         if "function_call" not in message:
             if self.raise_error_if_unparsable:
                 raise ValueError("No function call in response")

tests/store/test_duckdb_adapter.py

@@ -160,6 +160,7 @@ def test_the_embedding_function_variations(
         expected_name = "test_collection"
     else:
         # Specific case: Collection specified, model may or may not be specified
+        print("\n\n",model,"\n\n")
         db.insert(objs, collection=collection, model=model)
         expected_model = model if model else "all-MiniLM-L6-v2"
         expected_name = collection