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107 Open 1,090 Closed
107 Open 1,090 Closed
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Issues list

input reads for dorado polish Q
#1225 opened Jan 21, 2025 by bruzecruise
default_thread_allocations should not use std::thread::hardware_concurrency() enhancement New feature or request
#1223 opened Jan 20, 2025 by jbd
1
Base calling with Dorado in mode [email protected]_4mC_5mC@v2 mods For issues related to modified base calling question Issue is a question
#1221 opened Jan 16, 2025 by goismael1194
1
Performance on Apple M4
#1218 opened Jan 15, 2025 by diego-rt
5
dorado correct empty output
#1217 opened Jan 15, 2025 by malton-ont
Basecalling/demux+modbases: std::bad_alloc barcode Issues related to barcoding bug Something isn't working
#1213 opened Jan 9, 2025 by sklages
6
Feature request: Option for unsorted BAM output by dorado aligner
#1211 opened Jan 8, 2025 by cihanerkut
2
Dorado duplex using older dna model for V10? duplex Issues related to duplex basecalling question Issue is a question
#1210 opened Jan 6, 2025 by Patricie34
7
Difference between the [email protected] and [email protected] ? performance Issues related to basecalling performance
#1208 opened Jan 3, 2025 by VBHarrisN
6
QV score lower post dorado polish polish Issues related to polishing
#1205 opened Dec 31, 2024 by HananAlmulla
1
Documentation request for dorado polish per-base quality score output documentation Improvements or additions to documentation enhancement New feature or request polish Issues related to polishing
#1200 opened Dec 27, 2024 by eernst
3
dorado basecalling bam file end up corrupt during sort
#1197 opened Dec 26, 2024 by uribertocchi
7
Polishing index error polish Issues related to polishing
#1196 opened Dec 23, 2024 by ekhtan
13
Multi A100 expected CPU/GPU utilization in correction inference stage read_correction Read error correction
#1189 opened Dec 19, 2024 by ChristianKniep
2
Q: v0.9.0: 'std::invalid_argument' (core dump) bug Something isn't working
#1186 opened Dec 18, 2024 by sklages
15
Comparing the RTX 4090 and the RTX 6000 Ada
#1181 opened Dec 17, 2024 by ezherman
Dorado (by modkit dmr) gives different results between replicats
#1173 opened Dec 13, 2024 by DelphIONe
2
CPU utilization lower than expected performance Issues related to basecalling performance
#1171 opened Dec 10, 2024 by karlkashofer
4
dorado for m6A analysis
#1170 opened Dec 10, 2024 by baibhav-bioinfo
9
Base calling speed : twice the time for base calling with Dorado v0.8.1:0.8.3 performance Issues related to basecalling performance
#1159 opened Dec 3, 2024 by vaillan6
9
Request: Document GPU Performance in a Table documentation Improvements or additions to documentation enhancement New feature or request performance Issues related to basecalling performance
#1147 opened Nov 21, 2024 by Kirk3gaard
4
README.md missing inclusion of run ID information in dorado demux documentation Improvements or additions to documentation
#1144 opened Nov 20, 2024 by claczny
2
memory (RAM) usage for dorado correct read_correction Read error correction
#1137 opened Nov 18, 2024 by stephrom
2
Aligner: Create a merged file when using folder as input
#1133 opened Nov 15, 2024 by billytcl
2
Quality score differences when running dorado on the Gridion vs on a linux server models Issues related to model selection
#1110 opened Oct 29, 2024 by abridgeland
3
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