chore: troubleshooting CI

noamteyssier · Oct 3, 2024 · 3660944 · 3660944
1 parent 486d86c
commit 3660944
Showing 1 changed file with 3 additions and 0 deletions.
diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml
@@ -45,14 +45,17 @@ jobs:
 
       - name: Test with pytest
         run: |
+          source .venv/bin/activate
           pytest -v
 
       - name: Test table io from commandline
         run: |
+          source .venv/bin/activate
           geomux -i example/example.tsv.gz -o results_table.tab
 
       - name: Test adat io from commandline
         run: |
+          source .venv/bin/activate
           geomux -i example/example.h5ad -o results_table.tab
 
   # ostest: