chore: troubleshooting CI

.github/workflows/CI.yml

@@ -5,7 +5,7 @@ on: [push]
 jobs:
   ci:
     needs: [
-      # ostest, 
+      ostest, 
       full-ci,
     ]
     name: CI
@@ -49,37 +49,35 @@ jobs:
         run: |
           uvx geomux -i example/example.h5ad -o results_table.tab
 
-  # ostest:
-  #   runs-on: ${{ matrix.os }}
-  #   strategy:
-  #     max-parallel: 5
-  #     matrix:
-  #       os: ["windows-latest", "macos-latest"]
+  ostest:
+    runs-on: ${{ matrix.os }}
+    strategy:
+      max-parallel: 5
+      matrix:
+        os: ["windows-latest", "macos-latest"]
 
-  #   steps:
-  #   - uses: actions/checkout@v4
+    steps:
+    - uses: actions/checkout@v4
 
-  #   - name: Install uv
-  #     uses: astral-sh/setup-uv@v3
+    - name: Install uv
+      uses: astral-sh/setup-uv@v3
 
-  #   - name: Set up Python 3.11
-  #     run: uv python install 3.11
+    - name: Set up Python 3.11
+      run: uv python install 3.11
 
-  #   - name: Install project
-  #     run: |
-  #       uv sync --all-extras --dev
+    - name: Install project
+      run: |
+        uv sync --all-extras --dev
+        uv tool install .
 
-  #   - name: Test with pytest
-  #     run: |
-  #       source .venv/bin/activate
-  #       pytest -v
+    - name: Test with pytest
+      run: |
+        uv run pytest -v
 
-  #   - name: Test table io from commandline
-  #     run: |
-  #       source .venv/bin/activate
-  #       geomux -i example/example.tsv.gz -o results_table.tab
+    - name: Test table io from commandline
+      run: |
+        uvx geomux -i example/example.tsv.gz -o results_table.tab
 
-  #   - name: Test adat io from commandline
-  #     run: |
-  #       source .venv/bin/activate
-  #       geomux -i example/example.h5ad -o results_table.tab
+    - name: Test adat io from commandline
+      run: |
+        uvx geomux -i example/example.h5ad -o results_table.tab