chore: troubleshooting CI

noamteyssier · Oct 3, 2024 · c5d41cf · c5d41cf
1 parent 5b1ef6b
commit c5d41cf
Showing 1 changed file with 3 additions and 4 deletions.
diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml
@@ -39,20 +39,19 @@ jobs:
         run: |
           uv sync --all-extras --dev
 
-      - name: Activate venv
-        run: |
-          source .venv/bin/activate
-
       - name: Test with pytest
         run: |
+          source .venv/bin/activate
           pytest -v
 
       - name: Test table io from commandline
         run: |
+          source .venv/bin/activate
           geomux -i example/example.tsv.gz -o results_table.tab
 
       - name: Test adat io from commandline
         run: |
+          source .venv/bin/activate
           geomux -i example/example.h5ad -o results_table.tab
 
   # ostest: