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1. scapeML/scape scapeML/scape Public

   Single-cell Analysis of Perturbational Effects using Machine Learning

   Python 5 3

2. saezlab/liana-py saezlab/liana-py Public

   LIANA+: an all-in-one framework for cell-cell communication

   Python 200 25

3. MetExplore/dexom MetExplore/dexom Public

   Diversity-based enumeration of optimal context-specific metabolic networks

   MATLAB 6 1

4. covid19-modeling/pyncov-19 covid19-modeling/pyncov-19 Public

   Flexible mechanistic epidemiological model to learn and predict the spread of COVID-19

   Jupyter Notebook 21

5. yabox yabox Public

   Yet another black-box optimization library for Python

   Jupyter Notebook 138 16

6. citiususc/hipster citiususc/hipster Public

   Hipster4j is a lightweight and powerful heuristic search library for Java and Android. It contains common, fully customizable algorithms such as Dijkstra, A* (A-Star), DFS, BFS, Bellman-Ford and more.

   Java 325 87