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(fix): extension array indexers#9671

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Commits on Oct 18, 2024

• implement default_precision_timestamp, refactor coding/times.py and core/variable.py to use any-precision datetime/timedelta with autmatic inferring of resolution

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• align tests with new time resolution behaviour

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• timedelta decoding, fsspec handling

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• fixes in coding/times.py

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• add docs on time coding

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• attempt fixing doc tests

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• fix issue where out-of-bounds floating point values slipped in the processing, raise now early

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• convert to UTC first before stripping of tz in _unpack_time_units_and_ref_date

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• reorganize pandas compatibility code, remove unneeded code, attempt to fix mypy

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• another attempt to finally fix mypy

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• refactor out _check_date_is_after_shift

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• refactor out _maybe_strip_tz_from_timestamp

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• more refactoring in coding.times.py

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• more refactoring in coding.times.py

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• minor fix in time-coding.rst

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• set default resolution to "s", which actually means, use pandas lowest resolution, fix code and tests to allow this

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• Add section for default units, fix options

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• attempt to fix typing

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• fix scalar datetime/timedelta

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• fix user docs

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• Fix variable tests, mostly datetime/timedelta is inittialized with us-resolution

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• revert changes in _possible_convert_objects, this needs to be checked more carefully, for now using pd.Series to covert OMm type datetimes/timedeltas (will result in ns precision)

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• fix doc link

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Commits on Oct 23, 2024

• (fix): allow all extension array data types in pandas adapters

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• (fix): dataframes have no array attr

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Commits on Oct 24, 2024

• (fix): allow chunked numpy extension arrays because of test_pandas_array series creating an extension array when .array is accessed

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• (fix): dtypes for PandasIndex

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• (chore): remove test for unnecessary conversion

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• (revert): don't let through so much in as_compatible_data

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Commits on Oct 25, 2024

• (fix): account for series -> numpy conversions

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• (fix): ensure dtype check is for numpy type

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• (fix): convert pandas IntervalArray

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• Merge branch 'main' into ig/fix_extension_indexer

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Commits on Nov 8, 2024

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Commits on Nov 16, 2024

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• use set instead list

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Commits on Nov 17, 2024

• remove global option

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• mypy thinks unit is Literal, because the pandas-stubs suggest so, but the pandas code tells us otherwise

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• ignore mypy arg-type

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• fix docstring of default_precision_timestamp

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• add 'time_unit'-kwarg to decode_cf and descendent functions with "ns" as default.

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• fix tests

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• fix more tests

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• fix docstring

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• use pd.Timestamp(np.datetime64(cftime)) to convert from cftime to numpy

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Commits on Nov 18, 2024

• use dt = np.datetime64(cftime.isoformat()) to convert from cftime to numpy datetime64

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• fix time-coding.rst

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• use us in to_datetimeindex

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• revert back to us for datetimeindex tests

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• estimate fitting resolution for floating point values, when decoding times

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• add test

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• simplify recursive function, update tests

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Commits on Nov 19, 2024

• more refactoring, update tests

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• add fixture, apply fixture to more tests.

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Commits on Nov 21, 2024

• refactor cftime fallback in datetime decoding

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Commits on Nov 22, 2024

• use CFDatetimeCoder instance to transport unit/use_cftime

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Commits on Nov 25, 2024

• decode_times with CFDatetimeCoder

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• (fix): dtype type handling

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• fix tests for cftime_to_nptime

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• introduce pd.Timestamp instance check

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• warn if out-of-bound datetimes are encoded with standard calendar, fall back to cftime encoding, add fix for cftime issue where python datetimes are not encoded correctly with date2num.

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• fix time-coding.rst, add reference to time-series.rst.

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• try to fix typing, ignore one

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• revert doc-changes

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• Add a non-ns test for polyval, polyfit

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Commits on Jan 10, 2025

• Merge branch 'main' into any-time-resolution-2

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• more doc cosmetics

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• add whats-new.rst entry

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• add/fix coder docstring

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• add xr.date_range example as suggested per review

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• Apply suggestions from code review

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• Implement time_unit option for decode_cf_timedelta (pydata#3)

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• fix typing

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• use nanmin/nanmax, catch numpy RuntimeWarnings

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Commits on Jan 14, 2025

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• Merge branch 'any-time-resolution-2' into ig/fix_extension_indexer

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• Merge branch 'main' into any-time-resolution-2

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• Merge branch 'any-time-resolution-2' into ig/fix_extension_indexer

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• merge

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• Merge branch 'main' into ig/fix_extension_indexer

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• Merge branch 'main' into ig/fix_extension_indexer

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• (fix): try to address pandas comments

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• (fix): try-logic was not correct

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• Merge branch 'main' into ig/fix_extension_indexer

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• (refactor): remove super class casting

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• (fix): revert dataarray dtype change

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• (fix): just ignore dtype issue

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• (fix): ignore redefinition issue

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• Merge branch 'main' into ig/fix_extension_indexer

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• Merge branch 'main' into ig/fix_extension_indexer

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• Merge branch 'main' into ig/fix_extension_indexer

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