ci: put Rtmp directly on /__w/ folder #28
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
on: | |
push: | |
branches: [jomain, main] | |
pull_request: | |
branches: [main] | |
release: | |
types: [published] | |
workflow_dispatch: | |
name: pure pkgdown.yaml | |
permissions: read-all | |
jobs: | |
pkgdown: | |
runs-on: ubuntu-latest | |
container: bioconductor/bioconductor_docker:devel | |
# Only restrict concurrency for non-PR jobs | |
concurrency: | |
group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }} | |
env: | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
permissions: | |
contents: write | |
steps: | |
## Set the R library to the directory matching the | |
## R packages cache step further below when running on Docker (Linux). | |
- name: Set R Library home on Linux | |
if: runner.os == 'Linux' | |
run: | | |
mkdir /__w/_temp/Library | |
mkdir /__w/Rtmp | |
echo ".libPaths('/__w/_temp/Library')" > ~/.Rprofile | |
- name: Checkout package | |
uses: actions/checkout@v4 | |
- name: Repository metadata | |
uses: varunsridharan/action-repository-meta@main | |
with: | |
REPOSITORY: ${{github.repository}} | |
env: | |
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
- continue-on-error: true | |
run: | | |
git config --global --add safe.directory "$GITHUB_WORKSPACE" | |
- name: Setup pandoc from r-lib | |
if: runner.os != 'Linux' | |
uses: r-lib/actions/setup-pandoc@v2 | |
- name: Setup R from r-lib | |
if: runner.os != 'Linux' | |
uses: r-lib/actions/setup-r@v2 | |
with: | |
use-public-rspm: true | |
- uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
extra-packages: any::pkgdown, local::. | |
needs: website | |
- name: Setup tinytex from r-lib | |
if: runner.os != 'Linux' | |
uses: r-lib/actions/setup-tinytex@v2 | |
- name: Build articles | |
run: | | |
install.packages("unixtools", repos = "http://www.rforge.net/") | |
unixtools::set.tempdir("/__w/Rtmp") | |
pkgdown::build_articles(quiet = FALSE) | |
shell: Rscript {0} | |
- name: Build site | |
run: | | |
unixtools::set.tempdir("/__w/_temp/Rtmp") | |
pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE,preview = FALSE) | |
shell: Rscript {0} | |
- name: Deploy to GitHub pages 🚀 | |
if: github.event_name != 'pull_request' | |
uses: JamesIves/[email protected] | |
with: | |
clean: false | |
branch: gh-pages | |
folder: docs |