addition of logo and bibliography

rformassspectrometry · Oct 22, 2024 · ad32409 · ad32409
1 parent 2c42316
commit ad32409
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Showing 5 changed files with 4 additions and 4 deletions.
diff --git a/.Rbuildignore b/.Rbuildignore
@@ -12,7 +12,6 @@
 ^scripts$
 ^Dockerfile$
 _pkgdown.yml
-man/figures
 ^_pkgdown\.yml$
 ^docs$
 ^.RData$   
diff --git a/_pkgdown.yml b/_pkgdown.yml
@@ -2,10 +2,9 @@ url: https://rformassspectrometry.github.io/metabonaut/
 template:
   bootstrap: 5
   bslib:
-    bootswatch: lux
-    pkgdown-nav-height: 100px
+    bootswatch: flatly
 navbar:
-  bg: dark
+  bg: primary
   title: Metabonaut
   left:
   - text: Installation instruction

diff --git a/man/figures/logo.png b/man/figures/logo.png
diff --git a/vignettes/a-end-to-end-untargeted-metabolomics.qmd b/vignettes/a-end-to-end-untargeted-metabolomics.qmd
@@ -4,6 +4,7 @@ format: html
 tbl-cap-location: bottom
 editor: visual
 minimal: true
+bibliography: references.bib
 date: 'Compiled: `r format(Sys.Date(), "%B %d, %Y")`'
 vignette: >
   %\VignetteIndexEntry{Complete end-to-end LC-MS/MS Metabolomic Data analysis}
@@ -3140,3 +3141,4 @@ plot(eic_is) # show alignment effect
 #possible extra info:
 # -
 ```
+
diff --git a/vignettes/images/logo.png b/vignettes/images/logo.png