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feat: Allow for non-diploid genotypes #476

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jeeeesper
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Should close #474

@jeeeesper jeeeesper force-pushed the polyploid-genotype branch from 78461ca to d640186 Compare May 19, 2025 11:13
@jeeeesper jeeeesper changed the title Allow for non-diploid genotypes feat: Allow for non-diploid genotypes May 19, 2025
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Thanks @jeeeesper! Would you mind fixing up the clippy issues and add some test(s)?

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coveralls commented May 21, 2025

Pull Request Test Coverage Report for Build 15111500970

Details

  • 10 of 17 (58.82%) changed or added relevant lines in 1 file are covered.
  • 61 unchanged lines in 11 files lost coverage.
  • Overall coverage decreased (-0.2%) to 83.436%

Changes Missing Coverage Covered Lines Changed/Added Lines %
src/bcf/record.rs 10 17 58.82%
Files with Coverage Reduction New Missed Lines %
src/bam/buffer.rs 1 50.0%
src/bam/mod.rs 1 80.79%
src/bcf/buffer.rs 1 56.45%
src/bgzf/mod.rs 3 60.0%
src/utils.rs 3 71.43%
src/bam/pileup.rs 4 78.18%
src/bcf/mod.rs 5 72.69%
src/bcf/record.rs 9 77.54%
src/bam/record_serde.rs 11 56.42%
src/faidx/mod.rs 11 64.15%
Totals Coverage Status
Change from base Build 13877817877: -0.2%
Covered Lines: 2710
Relevant Lines: 3248

💛 - Coveralls

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dealing with mixed ploidy
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